Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_M23
(310 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 1.5
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 1.9
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 2.6
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 20 7.8
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 20 7.8
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 20 7.8
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 20 7.8
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 20 7.8
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 20 7.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 20 7.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 20 7.8
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 20 7.8
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.2 bits (45), Expect = 1.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 219 EAACKGPSPHANQDPAYHH 163
E + G SPH +Q P+ +H
Sbjct: 621 EISQDGSSPHFHQSPSQNH 639
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 1.9
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -2
Query: 237 QWSQETEAACKGPSPHANQDP 175
Q SQ+ + GP P +Q P
Sbjct: 11 QQSQQPSSGAPGPQPSPHQSP 31
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.4 bits (43), Expect = 2.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -2
Query: 303 RIQDHXYFSQCALTREGLC*PNQWSQETEAACK 205
+I+DH +QC R+G ET +AC+
Sbjct: 616 QIRDHKDVTQCISCRQGTV-----PDETHSACR 643
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 19.8 bits (39), Expect = 7.8
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 153 SFTGGDTQDLGWHADWAL 206
S TGGD D + +W L
Sbjct: 145 SETGGDLSDFITNGEWYL 162
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 19.8 bits (39), Expect = 7.8
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 153 SFTGGDTQDLGWHADWAL 206
S TGGD D + +W L
Sbjct: 145 SETGGDLSDFITNGEWYL 162
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 19.8 bits (39), Expect = 7.8
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 153 SFTGGDTQDLGWHADWAL 206
S TGGD D + +W L
Sbjct: 145 SETGGDLSDFITNGEWYL 162
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 19.8 bits (39), Expect = 7.8
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 153 SFTGGDTQDLGWHADWAL 206
S TGGD D + +W L
Sbjct: 145 SETGGDLSDFITNGEWYL 162
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 19.8 bits (39), Expect = 7.8
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 153 SFTGGDTQDLGWHADWAL 206
S TGGD D + +W L
Sbjct: 145 SETGGDLSDFITNGEWYL 162
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 19.8 bits (39), Expect = 7.8
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 153 SFTGGDTQDLGWHADWAL 206
S TGGD D + +W L
Sbjct: 145 SETGGDLSDFITNGEWYL 162
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.8 bits (39), Expect = 7.8
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 153 SFTGGDTQDLGWHADWAL 206
S TGGD D + +W L
Sbjct: 213 SETGGDLSDFITNGEWYL 230
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.8 bits (39), Expect = 7.8
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 153 SFTGGDTQDLGWHADWAL 206
S TGGD D + +W L
Sbjct: 213 SETGGDLSDFITNGEWYL 230
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 19.8 bits (39), Expect = 7.8
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 153 SFTGGDTQDLGW 188
SF G D LGW
Sbjct: 286 SFAGSDVTVLGW 297
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,767
Number of Sequences: 438
Number of extensions: 1802
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6471036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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