Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_M18
(511 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 35 0.006
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 35 0.008
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 33 0.033
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 31 0.076
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 30 0.18
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 30 0.18
SPAC589.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 30 0.23
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 29 0.40
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 29 0.40
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 28 0.93
SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces pomb... 27 1.2
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 27 1.6
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 27 2.2
SPBC1709.09 |||mitochondrial translation termination factor|Schi... 26 2.9
SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces... 26 2.9
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 26 2.9
SPBC609.05 |pob3||FACT complex component Pob3|Schizosaccharomyce... 26 3.8
SPAC23H4.11c |cnl2||centromere localized protein Cnl2|Schizosacc... 26 3.8
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 26 3.8
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 25 5.0
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 25 5.0
SPAC17G6.07c |||SNARE Slt1 |Schizosaccharomyces pombe|chr 1|||Ma... 25 5.0
SPBC1718.03 |ker1||DNA-directed RNA polymerase I complex subunit... 25 6.6
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 25 6.6
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 25 6.6
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 25 6.6
SPBC27B12.12c |||CorA family magnesium ion transporter |Schizosa... 25 6.6
SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces pomb... 25 6.6
SPAC222.15 |meu13|SPAC821.01|Tat binding protein 1|Schizosacchar... 25 8.7
SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyce... 25 8.7
SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces p... 25 8.7
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 35.1 bits (77), Expect = 0.006
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Frame = -2
Query: 468 TLEQQFXSLTKSKDAQX---FSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQ 298
T+E + SL KSK + F + ++ + +L N + + L + +A KA+++LEQ
Sbjct: 8 TIELDYDSL-KSKISNFNSIFDRFLQEERKKLLNNKNEYLRQLS-EINEAQKKAEKSLEQ 65
Query: 297 SRQNIERTAEELRKAHPD---VEKNATALREKLQAAVQNTVQESQKL 166
+ + E L K H + E+ + +EKL A ++ + S++L
Sbjct: 66 TEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAMLKRKQKLSEEL 112
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 34.7 bits (76), Expect = 0.008
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Frame = -2
Query: 483 KXFHKTLEQQFXSLTKSKDAQXF---SKAWKDGSESVLQQLNAFAKSLQGALGDANGKAK 313
K LEQ+ +L ++++A+ ++ + D S S +L A AK A DA A
Sbjct: 103 KTLQDLLEQRQVALREAREAEEELQRARQYNDRSTSEALELEARAKK---AAQDAE-LAS 158
Query: 312 EALEQSRQNIERTAEELRK-AHPDVEKNATALRE 214
E +++ +IER+A K A + E+ ATALRE
Sbjct: 159 ERAREAQSSIERSASLREKQAREEAERAATALRE 192
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 32.7 bits (71), Expect = 0.033
Identities = 32/123 (26%), Positives = 55/123 (44%)
Frame = -2
Query: 417 FSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVE 238
++ WK +SVL N + + L + K EALE+ +Q +E +E K +
Sbjct: 1331 YNSRWKLRFQSVL---NKYERVDPTQLEELK-KNCEALEKEKQELETKLQETAKETDTFK 1386
Query: 237 KNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIKK 58
+ +L E+ V+N +E ++ K + NEK K++ FA QE+ K
Sbjct: 1387 QQVNSLNEE----VENLKKEVEQANTKNTRLAAAWNEKCENLKKSSLTRFAHLKQELTNK 1442
Query: 57 IQE 49
+E
Sbjct: 1443 NKE 1445
Score = 25.0 bits (52), Expect = 6.6
Identities = 21/80 (26%), Positives = 41/80 (51%)
Frame = -2
Query: 270 EELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDD 91
EEL+K +EK +++L+ +Q T +E+ ++V+S + E E L +++ A
Sbjct: 1355 EELKKNCEALEKE----KQELETKLQETAKETDTFKQQVNS-LNEEVENLKKEVEQAN-- 1407
Query: 90 FAKNTQEVIKKIQEAANAKQ 31
KNT+ ++ N K+
Sbjct: 1408 -TKNTRLAAAWNEKCENLKK 1426
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 31.5 bits (68), Expect = 0.076
Identities = 33/156 (21%), Positives = 66/156 (42%), Gaps = 8/156 (5%)
Frame = -2
Query: 474 HKTLEQQFXSLTKSKDAQXFSKAWKDGSESVLQQLNAFAKSLQGALGDANG---KAKEAL 304
H+T+ +Q + +A + ES L N ++ L ++N K +E +
Sbjct: 625 HQTITKQLKDTSSKLQQLQLERANFEQKESTLSDENNDLRTKLLKLEESNKSLIKKQEDV 684
Query: 303 EQSRQNIERTAEELRKAHPDV---EKNATALREKLQ--AAVQNTVQESQKLAKKVSSNVQ 139
+ +NI+ E+LRK+ + + A LRE + T++ + S+ +
Sbjct: 685 DSLEKNIQTLKEDLRKSEEALRFSKLEAKNLREVIDNLKGKHETLEAQRNDLHSSLSDAK 744
Query: 138 ETNEKLAPKIKAAYDDFAKNTQEVIKKIQEAANAKQ 31
TN L+ ++ + +D + T V Q++ KQ
Sbjct: 745 NTNAILSSELTKSSEDVKRLTANVETLTQDSKAMKQ 780
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 30.3 bits (65), Expect = 0.18
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Frame = -2
Query: 321 KAKEALE---QSRQNIERTAEELRKAHPDVEKNATALREKLQAAV-----QNTVQESQKL 166
K KE +E Q ++ +ER E LRK D K+ + +AA+ + + E QKL
Sbjct: 128 KEKEEMEGSLQGKEKLEREVENLRK-ELDKYKDLVETEAEKRAAITKEECEKSWLEQQKL 186
Query: 165 AKKVSSNVQETNEKLAPKIK 106
K + T +KL KI+
Sbjct: 187 YKDMEQENASTIQKLTSKIR 206
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 30.3 bits (65), Expect = 0.18
Identities = 17/81 (20%), Positives = 38/81 (46%)
Frame = -2
Query: 369 NAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQN 190
N + ++ AL + KA + LE+ ++ E + EE+ H + T+ + + +
Sbjct: 337 NLVSLAIYEALYEKFLKACKDLEEVSKSYEESREEIEALHETFTEEVTSFQSTKRLKEEK 396
Query: 189 TVQESQKLAKKVSSNVQETNE 127
+QE ++ K + Q+ +E
Sbjct: 397 IIQEKSRVDKMIDEYRQKLSE 417
>SPAC589.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 168
Score = 29.9 bits (64), Expect = 0.23
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -2
Query: 402 KDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEE 265
KDG+++ +LN FAK L + + +A + + IE+++ E
Sbjct: 111 KDGTDAFANELNLFAKKLGFSKNSFDARALDTESEDETEIEKSSSE 156
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 29.1 bits (62), Expect = 0.40
Identities = 21/88 (23%), Positives = 46/88 (52%)
Frame = -2
Query: 306 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNE 127
++ Q+IE T L K D+E++ +++ + V + Q+ ++++ +Q+T E
Sbjct: 496 MKTQEQSIELT--RLYKQLQDIEEDYENKLMRMEQQWREDVDQLQEYVEEITQELQDTKE 553
Query: 126 KLAPKIKAAYDDFAKNTQEVIKKIQEAA 43
L+ K + DD+ +EV+ K++ A
Sbjct: 554 VLSKSSKES-DDY----EEVVGKLRTEA 576
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 29.1 bits (62), Expect = 0.40
Identities = 17/69 (24%), Positives = 38/69 (55%)
Frame = -2
Query: 321 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 142
K+++ LE S Q +E E + P+V++ +EK ++ V+ +E +K+S N+
Sbjct: 132 KSEKPLETS-QKVEIETVETKPGEPEVKQETNLQKEKKESKVKLESKE-----EKISRNL 185
Query: 141 QETNEKLAP 115
+ ++ ++P
Sbjct: 186 RSSSRSISP 194
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 27.9 bits (59), Expect = 0.93
Identities = 33/144 (22%), Positives = 59/144 (40%)
Frame = -2
Query: 501 TSNTTPKXFHKTLEQQFXSLTKSKDAQXFSKAWKDGSESVLQQLNAFAKSLQGALGDANG 322
+SN P + L +S +A + S + + A K L GA
Sbjct: 109 SSNNIPISYRDNLLSHVNGYARSMHNDRKVRASR--SRRISGMILAHFKRLSGA---DEK 163
Query: 321 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 142
KAKE ++ R +RTA E+RK +E+ R + A Q + Q +++ +
Sbjct: 164 KAKEEDKRIRLLAKRTAWEIRKKWKVIEREVRRRRAERAAEAQRVAGKEQ-----LANIL 218
Query: 141 QETNEKLAPKIKAAYDDFAKNTQE 70
+ + + L +I+ A + + T E
Sbjct: 219 KHSTDLLEARIERANINISAQTSE 242
>SPBC30D10.07c |||biotin-protein ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 631
Score = 27.5 bits (58), Expect = 1.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 291 ASTVPKPPWPCRSRLRALPG 350
AST+ K PWP + L +PG
Sbjct: 38 ASTLEKEPWPASTALLVMPG 57
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 27.1 bits (57), Expect = 1.6
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Frame = -2
Query: 468 TLEQQFXSLTKSKDAQXFSKAWKDGSESVLQQLNAFAKSLQGA------LGDANGKAKEA 307
T++ + SL K D + ++ ES L L L A L D+ KAK
Sbjct: 354 TIQIELESLRKETDTTSVER--REKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTE 411
Query: 306 LEQSRQNIERTAEE 265
LEQ+R +ERT E
Sbjct: 412 LEQARIELERTQRE 425
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 26.6 bits (56), Expect = 2.2
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = -2
Query: 354 SLQGALGDANGKAKEALEQSRQNIE-----RTAEELRKAHPDVEKNATALREKLQAA 199
S++ L + N + KE +E + RT +E EKN LRE+L+ A
Sbjct: 520 SMKDDLTEMNQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTA 576
>SPBC1709.09 |||mitochondrial translation termination
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 244
Score = 26.2 bits (55), Expect = 2.9
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = -2
Query: 291 QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPK 112
+NI + E+ R + NA+ + K Q + T++ Q+LAK + +++ E+L+
Sbjct: 136 KNILKAIEDSRYPFVANKLNASTIEVKPQ---RTTLESRQQLAKVLEGYAKDSREQLSAM 192
Query: 111 IKAAYDDFAKN 79
+ AKN
Sbjct: 193 RTELKKEIAKN 203
>SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 172
Score = 26.2 bits (55), Expect = 2.9
Identities = 13/86 (15%), Positives = 41/86 (47%)
Frame = -2
Query: 315 KEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQE 136
K ++R+N++ + + P+++ + + +L+ +++++ Q + + V+E
Sbjct: 81 KRRNRKARENLKVNVSSIGEVLPEIDLDISVANSRLKPVIKDSLSSKQTKSSMKRNTVEE 140
Query: 135 TNEKLAPKIKAAYDDFAKNTQEVIKK 58
E+ +K + F N E +++
Sbjct: 141 I-ERFQAILK--HPSFVSNPLETVRE 163
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 26.2 bits (55), Expect = 2.9
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = -2
Query: 306 LEQSRQNIERTAEELRKAHPDVEK 235
+EQ+R E T E++++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPBC609.05 |pob3||FACT complex component Pob3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 512
Score = 25.8 bits (54), Expect = 3.8
Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Frame = -2
Query: 159 KVSSNVQET--NEKLAPKIKAAYD 94
+V N++ET EK A K+KA+YD
Sbjct: 299 EVDLNIEETVLKEKYADKVKASYD 322
>SPAC23H4.11c |cnl2||centromere localized protein
Cnl2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 25.8 bits (54), Expect = 3.8
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = -2
Query: 315 KEALEQSRQNIERTAEELRKAHPD--VEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 142
++ L + R NI ++ + K+ D + N L+ A+ + V+E ++
Sbjct: 53 QKRLAKLRANIHLESQVIGKSRIDRMLATNVEKLQTVSHASTLHDVEEFYTSHSAKPLDI 112
Query: 141 QETNEKLAPKIKAAY 97
E NE+L+ +++AY
Sbjct: 113 SEINERLSEAVQSAY 127
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 25.8 bits (54), Expect = 3.8
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -2
Query: 423 QXFSKAWKDGSESVLQQLNAFAKSLQGALGD-ANGKAKEALEQSR-QNIERTAE 268
+ + A+ + SVLQ+L+ + +QG LG N AL Q + QN++ E
Sbjct: 79 EDMANAFAEKRRSVLQELSELEEEVQGILGVLENPDLIAALRQDKGQNLQHLQE 132
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 25.4 bits (53), Expect = 5.0
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -2
Query: 264 LRKAHPDVEKNATALREKLQAAVQNTVQE 178
L AH D+E T++RE+L++ + +E
Sbjct: 267 LDSAHSDLELELTSIRERLESLILEKQEE 295
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 25.4 bits (53), Expect = 5.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 327 NGKAKEALEQSRQNIERTAEELRKAHPDVEKN 232
N K KE E++ + EELR+A PD E++
Sbjct: 22 NEKLKEDFEENVSIDVKIHEELRRALPDYEES 53
>SPAC17G6.07c |||SNARE Slt1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 222
Score = 25.4 bits (53), Expect = 5.0
Identities = 14/66 (21%), Positives = 33/66 (50%)
Frame = -2
Query: 240 EKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAKNTQEVIK 61
EK + +EK A ++QE + ++ SNV+ +N +L ++ + +++ +
Sbjct: 83 EKKIKSKQEKEIAHALQSIQERELRERQQMSNVEASNAQLLTNQRSMQTEISESLLHLAS 142
Query: 60 KIQEAA 43
++E A
Sbjct: 143 VLKENA 148
>SPBC1718.03 |ker1||DNA-directed RNA polymerase I complex subunit
subunit Ker1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 25.0 bits (52), Expect = 6.6
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -2
Query: 402 KDGSESVLQQLNAFAKSLQG 343
K GSESVL QLN L+G
Sbjct: 40 KSGSESVLSQLNRVLMYLKG 59
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 25.0 bits (52), Expect = 6.6
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 212 FSRRAVAFFSTSGWALRSSSAVRSMF 289
FSR V FFS AL+S S + +MF
Sbjct: 570 FSRGGVLFFSILFCALQSLSEIANMF 595
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 25.0 bits (52), Expect = 6.6
Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = -2
Query: 297 SRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQE-TNEKL 121
S NI+ + + ++ ++EKN R ++ A ++ + +Q L ++ + +E N K
Sbjct: 630 SAGNIDDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKY 689
Query: 120 APKIKAAYDDFAKNTQEVIKK 58
++ A N E KK
Sbjct: 690 QQQLSTDRLTNANNDVEAFKK 710
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 25.0 bits (52), Expect = 6.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 336 GDANGKAKEALEQSRQNIERTAEE 265
G NG+AKE E+ R ++T E+
Sbjct: 473 GKGNGRAKETPEEKRARKKKTKED 496
>SPBC27B12.12c |||CorA family magnesium ion transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.0 bits (52), Expect = 6.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 285 CSASTVPKPPWPCRSRLRALPGDS 356
C +T+PKPP+ + L LP S
Sbjct: 290 CPHTTIPKPPYQSDTDLTELPTKS 313
>SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 25.0 bits (52), Expect = 6.6
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = -2
Query: 300 QSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSS 148
++RQ E A+ +RK+ PDV + ++ +V + +E + +SS
Sbjct: 284 ENRQFSEYVADRIRKSFPDVSFKNLHVLSCMEDSVMSPFRELGSVTSSMSS 334
>SPAC222.15 |meu13|SPAC821.01|Tat binding protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 216
Score = 24.6 bits (51), Expect = 8.7
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -2
Query: 222 LREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYDDFAK 82
+REK+Q+ + + S KL + V++ +++ K Y DFAK
Sbjct: 129 IREKIQSIDKEIEETSSKLESLRNGTVKQISKEAMQKTDKNY-DFAK 174
>SPBC1921.02 |rad60||DNA repair protein Rad60 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 406
Score = 24.6 bits (51), Expect = 8.7
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 7/139 (5%)
Frame = -2
Query: 444 LTKSKDAQXFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEE 265
+ S D++ S+ D ++ L+ +NA Q + K+ E L SRQ+ A+E
Sbjct: 28 IASSSDSEEESEL--DTNKQALEHINA-----QKNITHNENKSAEPL--SRQSTILDADE 78
Query: 264 LRKAHPDVEKNATAL--REKLQAAVQNTVQE-----SQKLAKKVSSNVQETNEKLAPKIK 106
+ D NA R ++A+ Q + + A + +N + L+
Sbjct: 79 GNQDVSDTTPNACLNEGRHSPKSAISCVTQPVSPVYNTRAAANLRNNSINSEAALSTTSS 138
Query: 105 AAYDDFAKNTQEVIKKIQE 49
DDFA+ +E+ +++QE
Sbjct: 139 LLDDDFARRLEEIDRQVQE 157
>SPBC17D1.01 ||SPBC17D11.09|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 584
Score = 24.6 bits (51), Expect = 8.7
Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = -2
Query: 294 RQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETN-EKLA 118
R + + A++L + P +EK E + + +E L++ SSN N + L
Sbjct: 189 RCRVNKKAKKLFGSEPSIEKTNWIEAEFTRRHTKRKEKERACLSQNQSSNASRANSQSLL 248
Query: 117 PKIKAAYDDFAKNTQEVIKKIQEAANA 37
P + + + N I A NA
Sbjct: 249 PDLDLLATNSSANAVLQGSAINNALNA 275
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,389,870
Number of Sequences: 5004
Number of extensions: 21094
Number of successful extensions: 131
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 204242806
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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