Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_M15
         (818 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   2.6  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    23   4.5  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    23   4.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   7.8  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +3

Query: 36  YRLIQSYYFCSKLKIYIHMYTYTSQLLDINSNMNLSYENRYHNDISSF 179
           + +I  Y+F     + + +YTYTS LL+I      S +++       F
Sbjct: 207 FGMIMMYWF----PLVVIIYTYTSILLEIRRRSKKSEDDKIRRSSIGF 250


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 93  YTYTSQLLDINSNMNLSYENRYHND 167
           Y Y S   + N+N N +Y N Y+N+
Sbjct: 89  YKY-SNYNNYNNNYNNNYNNNYNNN 112


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 93  YTYTSQLLDINSNMNLSYENRYHND 167
           Y Y S   + N+N N +Y N Y+N+
Sbjct: 89  YKY-SNYNNYNNNYNNNYNNNYNNN 112


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 132  MNLSYENRYHNDI 170
            ++L  ENRYH DI
Sbjct: 1105 LSLRDENRYHEDI 1117


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,777
Number of Sequences: 438
Number of extensions: 3890
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)