Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_M14
         (745 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical pr...    29   2.6  
X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein.    29   2.6  
Z83239-9|CAB05811.1|  517|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z81099-4|CAB03189.1|  517|Caenorhabditis elegans Hypothetical pr...    28   6.1  

>Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical
           protein T02C12.1 protein.
          Length = 1017

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -1

Query: 286 INYIQNKILCK--KLPKTKNSCSL*ILCIILVNVNRAPHLVMINFKLKFHNQYIKKYIR 116
           I Y  NK++C   ++P+T     L   C  + NV     L  ++ KLK H  Y  + ++
Sbjct: 438 IEYFNNKVICDLVEIPRTGILSILDEACASIGNVTDKVFLGELDKKLKSHKHYTSRNLK 496


>X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein.
          Length = 1017

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -1

Query: 286 INYIQNKILCK--KLPKTKNSCSL*ILCIILVNVNRAPHLVMINFKLKFHNQYIKKYIR 116
           I Y  NK++C   ++P+T     L   C  + NV     L  ++ KLK H  Y  + ++
Sbjct: 438 IEYFNNKVICDLVEIPRTGILSILDEACASIGNVTDKVFLGELDKKLKSHKHYTSRNLK 496


>Z83239-9|CAB05811.1|  517|Caenorhabditis elegans Hypothetical
           protein K08F9.4 protein.
          Length = 517

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +3

Query: 552 RMTKMLTKEEYLHFHLKFDKENLKCSLNDIKIKSSVQRNLIQQQKYCW 695
           R+ K L  + ++   L +DK+ LKC+ N+ K+   V RN++     C+
Sbjct: 120 RLAKQLNYKGHIFEFLGYDKDGLKCT-NNTKLSVKV-RNVLTWPTLCF 165


>Z81099-4|CAB03189.1|  517|Caenorhabditis elegans Hypothetical
           protein K08F9.4 protein.
          Length = 517

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 15/48 (31%), Positives = 27/48 (56%)
 Frame = +3

Query: 552 RMTKMLTKEEYLHFHLKFDKENLKCSLNDIKIKSSVQRNLIQQQKYCW 695
           R+ K L  + ++   L +DK+ LKC+ N+ K+   V RN++     C+
Sbjct: 120 RLAKQLNYKGHIFEFLGYDKDGLKCT-NNTKLSVKV-RNVLTWPTLCF 165


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,298,368
Number of Sequences: 27780
Number of extensions: 243015
Number of successful extensions: 617
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)