Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_M12
         (775 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           25   0.78 
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           25   0.78 
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   4.2  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   5.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   7.3  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   7.3  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   7.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   7.3  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   9.6  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   9.6  

>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 640 RKSRYSLNLKLQFPQTKLPHPKNL 569
           R+ RY+  LK   P+ K P PK+L
Sbjct: 54  RRHRYNFQLKPYNPEHKPPGPKDL 77


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 25.0 bits (52), Expect = 0.78
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 640 RKSRYSLNLKLQFPQTKLPHPKNL 569
           R+ RY+  LK   P+ K P PK+L
Sbjct: 55  RRHRYNFQLKPYNPEHKPPGPKDL 78


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = -2

Query: 378 FQCC*TPVFKIDVVVL*ISIMLYYLFP--IHCLIV 280
           + CC  P   I  VV+     LYY F   + C+++
Sbjct: 211 YNCCPEPYIDITFVVIIRRRTLYYFFNLIVPCVLI 245


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -2

Query: 459 NLQFSFMITVMLLQCIQPV 403
           N+QFS +   ++++C +PV
Sbjct: 700 NVQFSVLYGFVIIECQEPV 718


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = -1

Query: 496 FSTTFNFPTFNQQPSVQFYDYSYAVAVYTTSM 401
           +S    FP  N+  S+ +Y Y Y   +    M
Sbjct: 303 YSNGVTFPQRNRFSSLPYYKYKYLNVINALEM 334


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = -1

Query: 496 FSTTFNFPTFNQQPSVQFYDYSYAVAVYTTSM 401
           +S    FP  N+  S+ +Y Y Y   +    M
Sbjct: 303 YSNGVTFPQRNRFSSLPYYKYKYLNVINALEM 334


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = +3

Query: 165 ILCYANSTQMLSSMESITC 221
           ++CY N+  +L++  ++TC
Sbjct: 562 LVCYLNTFLLLATPTTVTC 580


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = +3

Query: 165 ILCYANSTQMLSSMESITC 221
           ++CY N+  +L++  ++TC
Sbjct: 652 LVCYLNTFLLLATPTTVTC 670


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 6  TKMCHKYNLVF 38
          T MCHKY L F
Sbjct: 51 TFMCHKYGLRF 61


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +1

Query: 334 NYNIYFKYW 360
           NY +Y++YW
Sbjct: 566 NYKLYWRYW 574


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,806
Number of Sequences: 438
Number of extensions: 4016
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)