BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_M11
(338 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA 1... 43 3e-04
D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein pr... 42 4e-04
Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)... 30 1.6
U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain pro... 30 1.6
AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (meros... 30 1.6
AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (meros... 30 1.6
AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (meros... 30 1.6
AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (meros... 30 1.6
AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (meros... 30 1.6
AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (meros... 30 1.6
AK094821-1|BAC04429.1| 574|Homo sapiens protein ( Homo sapiens ... 29 3.7
AF055136-1|AAC26019.1| 2155|Homo sapiens alpha-tectorin protein. 29 3.7
U69263-1|AAC51260.2| 956|Homo sapiens matrilin-2 precursor prot... 28 6.4
M73980-1|AAA60614.1| 2444|Homo sapiens TAN1 protein. 28 6.4
BC016394-1|AAH16394.1| 715|Homo sapiens MATN2 protein protein. 28 6.4
BC010444-1|AAH10444.1| 937|Homo sapiens matrilin 2 protein. 28 6.4
AL833931-1|CAD38787.1| 1016|Homo sapiens hypothetical protein pr... 28 6.4
AK075489-1|BAC11648.1| 451|Homo sapiens rase 7. protein. 28 6.4
AF308602-1|AAG33848.1| 2556|Homo sapiens NOTCH 1 protein. 28 6.4
Y13341-1|CAA73785.1| 310|Homo sapiens matrilin-3 precursor prot... 28 8.5
BC139907-1|AAI39908.1| 486|Homo sapiens matrilin 3 protein. 28 8.5
AY358351-1|AAQ88717.1| 945|Homo sapiens GARS1883 protein. 28 8.5
AL359832-2|CAI16737.1| 945|Homo sapiens unc-5 homolog B (C. ele... 28 8.5
AL359384-3|CAI16089.1| 945|Homo sapiens unc-5 homolog B (C. ele... 28 8.5
AJ224741-1|CAA12110.1| 486|Homo sapiens matrilin-3 protein. 28 8.5
AJ001047-1|CAA04501.1| 303|Homo sapiens Matrilin-3 protein. 28 8.5
AC079145-2|AAX88937.1| 486|Homo sapiens unknown protein. 28 8.5
AB096256-1|BAC57998.1| 945|Homo sapiens p53-regulated receptor ... 28 8.5
>AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA
1-2843] protein.
Length = 2843
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = -3
Query: 204 EYGCPENAHWT--DDPCVRTCDDPY-LTNTA-CVGALIQTCHCNDGLVFNADK 58
E CPEN+H+ PC +C P LT A C G ++ C C+ G V +AD+
Sbjct: 1947 EITCPENSHYEVCGSPCPASCPSPAPLTTPAVCEGPCVEGCQCDAGFVLSADR 1999
>D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein
protein.
Length = 5405
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = -3
Query: 204 EYGCPENAHWT--DDPCVRTCDDPY-LTNTA-CVGALIQTCHCNDGLVFNADK 58
E CPEN+H+ PC +C P LT A C G ++ C C+ G V +AD+
Sbjct: 1947 EITCPENSHYEVCGPPCPASCPSPAPLTTPAVCEGPCVEGCQCDAGFVLSADR 1999
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = -3
Query: 204 EYGCPENAHWT--DDPCVRTCDDPY-LTNTA-CVGALIQTCHCNDGLVFNADK 58
E CPEN+H+ PC +C P LT A C G ++ C C+ G V +AD+
Sbjct: 3148 EITCPENSHYEVCGPPCPASCPSPAPLTTPAVCEGPCVEGCQCDAGFVLSADR 3200
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Frame = -3
Query: 204 EYGCPENAHWT--DDPCVRTCDDPY-LTNTA-CVGALIQTCHCNDGLVFNADK 58
E CPEN+H+ PC +C P LT A C G ++ C C+ G V +AD+
Sbjct: 4349 EITCPENSHYEVCGPPCPASCPSPAPLTTPAVCEGPCVEGCQCDAGFVLSADR 4401
>Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)
protein.
Length = 3110
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -3
Query: 198 GCPENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFN 67
GCP +T C R C + Y + G Q C CND L F+
Sbjct: 834 GCPVG--YTGPRCER-CAEGYFGQPSVPGGSCQPCQCNDNLDFS 874
>U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain
protein.
Length = 3110
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -3
Query: 198 GCPENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFN 67
GCP +T C R C + Y + G Q C CND L F+
Sbjct: 834 GCPVG--YTGPRCER-CAEGYFGQPSVPGGSCQPCQCNDNLDFS 874
>AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -3
Query: 198 GCPENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFN 67
GCP +T C R C + Y + G Q C CND L F+
Sbjct: 834 GCPVG--YTGPRCER-CAEGYFGQPSVPGGSCQPCQCNDNLDFS 874
>AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -3
Query: 198 GCPENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFN 67
GCP +T C R C + Y + G Q C CND L F+
Sbjct: 834 GCPVG--YTGPRCER-CAEGYFGQPSVPGGSCQPCQCNDNLDFS 874
>AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -3
Query: 198 GCPENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFN 67
GCP +T C R C + Y + G Q C CND L F+
Sbjct: 834 GCPVG--YTGPRCER-CAEGYFGQPSVPGGSCQPCQCNDNLDFS 874
>AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -3
Query: 198 GCPENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFN 67
GCP +T C R C + Y + G Q C CND L F+
Sbjct: 834 GCPVG--YTGPRCER-CAEGYFGQPSVPGGSCQPCQCNDNLDFS 874
>AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -3
Query: 198 GCPENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFN 67
GCP +T C R C + Y + G Q C CND L F+
Sbjct: 834 GCPVG--YTGPRCER-CAEGYFGQPSVPGGSCQPCQCNDNLDFS 874
>AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -3
Query: 198 GCPENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFN 67
GCP +T C R C + Y + G Q C CND L F+
Sbjct: 834 GCPVG--YTGPRCER-CAEGYFGQPSVPGGSCQPCQCNDNLDFS 874
>AK094821-1|BAC04429.1| 574|Homo sapiens protein ( Homo sapiens
cDNA FLJ37502 fis, clone BRAWH2016446, moderately
similar to TAT-BINDING HOMOLOG 7. ).
Length = 574
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 118 ASGVSQVRVVAGPHAGVISPMGIFRASIFGSAGLESHH 231
ASG+ + RV G + PM I ++ F S G SHH
Sbjct: 371 ASGILRERVKVGASLADVDPMNIDKSVRFDSIGGLSHH 408
>AF055136-1|AAC26019.1| 2155|Homo sapiens alpha-tectorin protein.
Length = 2155
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -3
Query: 195 CPENAHWT--DDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADKKMCAH 43
CP +H++ C TC D + C + C CN G V + + + H
Sbjct: 597 CPSFSHYSVCTSSCPDTCSD-LTASRNCATPCTEGCECNQGFVLSTSQCVPLH 648
>U69263-1|AAC51260.2| 956|Homo sapiens matrilin-2 precursor
protein.
Length = 956
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -3
Query: 195 CPENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADKKMC 49
C + H CV T DD Y +CHC G N DKK C
Sbjct: 365 CASSNHGCQHECVNT-DDSY------------SCHCLKGFTLNPDKKTC 400
>M73980-1|AAA60614.1| 2444|Homo sapiens TAN1 protein.
Length = 2444
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -3
Query: 201 YGCPENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDG 79
Y CP WT C D+ L AC TCH G
Sbjct: 279 YNCPCPPEWTGQYCTEDVDECQLMPNACQNG--GTCHNTHG 317
>BC016394-1|AAH16394.1| 715|Homo sapiens MATN2 protein protein.
Length = 715
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -3
Query: 195 CPENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADKKMC 49
C + H CV T DD Y +CHC G N DKK C
Sbjct: 124 CASSNHGCQHECVNT-DDSY------------SCHCLKGFTLNPDKKTC 159
>BC010444-1|AAH10444.1| 937|Homo sapiens matrilin 2 protein.
Length = 937
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -3
Query: 195 CPENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADKKMC 49
C + H CV T DD Y +CHC G N DKK C
Sbjct: 365 CASSNHGCQHECVNT-DDSY------------SCHCLKGFTLNPDKKTC 400
>AL833931-1|CAD38787.1| 1016|Homo sapiens hypothetical protein
protein.
Length = 1016
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -3
Query: 195 CPENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADKKMC 49
C + H CV T DD Y +CHC G N DKK C
Sbjct: 425 CASSNHGCQHECVNT-DDSY------------SCHCLKGFTLNPDKKTC 460
>AK075489-1|BAC11648.1| 451|Homo sapiens rase 7. protein.
Length = 451
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -3
Query: 195 CPENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADKKMC 49
C + H CV T DD Y +CHC G N DKK C
Sbjct: 365 CASSNHGCQHECVNT-DDSY------------SCHCLKGFTLNPDKKTC 400
>AF308602-1|AAG33848.1| 2556|Homo sapiens NOTCH 1 protein.
Length = 2556
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -3
Query: 201 YGCPENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDG 79
Y CP WT C D+ L AC TCH G
Sbjct: 279 YNCPCPPEWTGQYCTEDVDECQLMPNACQNG--GTCHNTHG 317
>Y13341-1|CAA73785.1| 310|Homo sapiens matrilin-3 precursor
protein.
Length = 310
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 96 CHCNDGLVFNADKKMCA 46
C C+ G NADKK C+
Sbjct: 113 CECSQGYTLNADKKTCS 129
>BC139907-1|AAI39908.1| 486|Homo sapiens matrilin 3 protein.
Length = 486
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 96 CHCNDGLVFNADKKMCA 46
C C+ G NADKK C+
Sbjct: 289 CECSQGYTLNADKKTCS 305
>AY358351-1|AAQ88717.1| 945|Homo sapiens GARS1883 protein.
Length = 945
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = -3
Query: 189 ENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADKKM 52
E AHW C+ P C G L+ + +C DGL K +
Sbjct: 317 ECAHWRSRECM--APPPQNGGRDCSGTLLDSKNCTDGLCMQNKKTL 360
>AL359832-2|CAI16737.1| 945|Homo sapiens unc-5 homolog B (C.
elegans) protein.
Length = 945
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = -3
Query: 189 ENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADKKM 52
E AHW C+ P C G L+ + +C DGL K +
Sbjct: 317 ECAHWRSRECM--APPPQNGGRDCSGTLLDSKNCTDGLCMQNKKTL 360
>AL359384-3|CAI16089.1| 945|Homo sapiens unc-5 homolog B (C.
elegans) protein.
Length = 945
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = -3
Query: 189 ENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADKKM 52
E AHW C+ P C G L+ + +C DGL K +
Sbjct: 317 ECAHWRSRECM--APPPQNGGRDCSGTLLDSKNCTDGLCMQNKKTL 360
>AJ224741-1|CAA12110.1| 486|Homo sapiens matrilin-3 protein.
Length = 486
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 96 CHCNDGLVFNADKKMCA 46
C C+ G NADKK C+
Sbjct: 289 CECSQGYTLNADKKTCS 305
>AJ001047-1|CAA04501.1| 303|Homo sapiens Matrilin-3 protein.
Length = 303
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 96 CHCNDGLVFNADKKMCA 46
C C+ G NADKK C+
Sbjct: 106 CECSQGYTLNADKKTCS 122
>AC079145-2|AAX88937.1| 486|Homo sapiens unknown protein.
Length = 486
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 96 CHCNDGLVFNADKKMCA 46
C C+ G NADKK C+
Sbjct: 289 CECSQGYTLNADKKTCS 305
>AB096256-1|BAC57998.1| 945|Homo sapiens p53-regulated receptor for
death and life protein.
Length = 945
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = -3
Query: 189 ENAHWTDDPCVRTCDDPYLTNTACVGALIQTCHCNDGLVFNADKKM 52
E AHW C+ P C G L+ + +C DGL K +
Sbjct: 317 ECAHWRSRECM--APPPQNGGRDCSGTLLDSKNCTDGLCMQNKKTL 360
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,464,767
Number of Sequences: 237096
Number of extensions: 788013
Number of successful extensions: 2046
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2046
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1852524224
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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