Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_M04
         (799 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22ZG9 Cluster: Putative uncharacterized protein; n=5; ...    34   4.8  
UniRef50_A3I6F4 Cluster: Putative uncharacterized protein; n=1; ...    33   6.3  
UniRef50_A2D9W8 Cluster: Putative uncharacterized protein; n=2; ...    33   8.3  

>UniRef50_Q22ZG9 Cluster: Putative uncharacterized protein; n=5;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1580

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = -1

Query: 544 WILSYES*FHCFSYLYGFYIISRHTIAYLQN*KAQNNNYLVNRKL 410
           WIL Y++ F  F  +YGF++  + TI   Q  K Q N    + KL
Sbjct: 361 WILIYQTIFQIFFQIYGFHLDKQQTIFNKQQLKNQKNRNTNDGKL 405



 Score = 33.9 bits (74), Expect = 4.8
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = -1

Query: 544  WILSYES*FHCFSYLYGFYIISRHTIAYLQN*KAQNNNYLVNRKL 410
            WIL Y++ F  F  +YGF++  + TI   Q  K Q N    + KL
Sbjct: 1213 WILIYQTIFQIFFQIYGFHLDKQQTIFNKQQLKNQKNRNTNDGKL 1257


>UniRef50_A3I6F4 Cluster: Putative uncharacterized protein; n=1;
           Bacillus sp. B14905|Rep: Putative uncharacterized
           protein - Bacillus sp. B14905
          Length = 150

 Score = 33.5 bits (73), Expect = 6.3
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -3

Query: 290 FSIVLLFVVLQTLALNLKIDFPEINYNNNYSVFFCFADHLLP 165
           F ++LL  +L T    + + F  + Y N ++++F F  +LLP
Sbjct: 91  FLVLLLMTLLTTFLEGIFVFFDRVIYQNGWNIYFTFFSYLLP 132


>UniRef50_A2D9W8 Cluster: Putative uncharacterized protein; n=2;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 410

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
 Frame = -2

Query: 732 PFVTLNFICRKSAVIKSFVIAA*YHTCYLNKTYVLSEQYKELLLHRKSNH--TYCITLSI 559
           P V  N +   +A  KS      Y  CY+ KT+ ++ Q  E+    K NH  T    + I
Sbjct: 194 PRVAENLLSLAAAKEKSIFKIQCYEICYILKTFSMTNQLMEVFAKYKENHDVTCHFAIKI 253

Query: 558 INTMFGYFLMKA 523
            N +    L+KA
Sbjct: 254 FNDISIDILLKA 265


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,709,031
Number of Sequences: 1657284
Number of extensions: 15028787
Number of successful extensions: 34320
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34308
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)