Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_M04
         (799 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.8  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   6.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   8.6  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   8.6  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -2

Query: 711 ICRKSAVIKSFVIAA*YHTCYLNKTYVLSEQYKELLLHRKSNH--TYCITLSIIN 553
           +C K  +++     + Y+TC       +S+  K + + RK NH   Y + L+I N
Sbjct: 442 VCTKEGIVRDPSDCSVYYTC-------VSDGSKLVSIQRKCNHGLVYDLELNICN 489


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 104 AVCRDVAGGSRGYCVPSSTHK 166
           A+C+D  G    YC P  T K
Sbjct: 430 AICQDKLGDYACYCPPKHTGK 450


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -2

Query: 129 PPATSLHTARDNTLTNPQTSLTLNELYCSNMILF 28
           PP + +         +PQ  LTL+E+Y   M LF
Sbjct: 141 PPYSYISLITMAIQNSPQKMLTLSEIYQFIMDLF 174


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 142 LCPELYSQGSKWSAK 186
           +CPE+ ++ S W+ K
Sbjct: 312 ICPEILNKDSGWTKK 326


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 5/9 (55%), Positives = 9/9 (100%)
 Frame = +3

Query: 561 WIVLCNMYD 587
           WI+LCN+++
Sbjct: 118 WIILCNIFE 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,934
Number of Sequences: 336
Number of extensions: 4711
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)