Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_M04
(799 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 29 0.038
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 29 0.038
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 27 0.20
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 27 0.20
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 27 0.20
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 27 0.20
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 27 0.20
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 27 0.20
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 27 0.20
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 27 0.20
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 27 0.20
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 25 0.62
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 25 1.1
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 25 1.1
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 7.6
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 7.6
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 7.6
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 29.5 bits (63), Expect = 0.038
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -1
Query: 487 IISRHTIAYLQN*KAQNNNYLVNRKLTQH-NRTIRVPQRTGAP-FCSYFKPRP 335
IIS + Y+ N NNN N+KL + N ++P P +C F PRP
Sbjct: 81 IISSLSNNYISNISNYNNNNNYNKKLYYNINYIEQIPVPVPVPIYCGNFPPRP 133
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 29.5 bits (63), Expect = 0.038
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -1
Query: 487 IISRHTIAYLQN*KAQNNNYLVNRKLTQH-NRTIRVPQRTGAP-FCSYFKPRP 335
IIS + Y+ N NNN N+KL + N ++P P +C F PRP
Sbjct: 319 IISSLSNNYISNISNYNNNNNYNKKLYYNINYIEQIPVPVPVPIYCGNFPPRP 371
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 27.1 bits (57), Expect = 0.20
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 706 TNEIQRNKWIXAVRLERNETNWTHCKNXTI 795
TNEI ++ + AV +E++E CK I
Sbjct: 183 TNEITEHRTVLAVNIEKSENETKTCKKYAI 212
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 27.1 bits (57), Expect = 0.20
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 706 TNEIQRNKWIXAVRLERNETNWTHCKNXTI 795
TNEI ++ + AV +E++E CK I
Sbjct: 183 TNEITEHRTVLAVNIEKSENETKTCKKYAI 212
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 27.1 bits (57), Expect = 0.20
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 706 TNEIQRNKWIXAVRLERNETNWTHCKNXTI 795
TNEI ++ + AV +E++E CK I
Sbjct: 183 TNEITEHRTVLAVNIEKSENETKTCKKYAI 212
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 27.1 bits (57), Expect = 0.20
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 706 TNEIQRNKWIXAVRLERNETNWTHCKNXTI 795
TNEI ++ + AV +E++E CK I
Sbjct: 183 TNEITEHRTVLAVNIEKSENETKTCKKYAI 212
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 27.1 bits (57), Expect = 0.20
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 706 TNEIQRNKWIXAVRLERNETNWTHCKNXTI 795
TNEI ++ + AV +E++E CK I
Sbjct: 183 TNEITEHRTVLAVNIEKSENETKTCKKYAI 212
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 27.1 bits (57), Expect = 0.20
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 706 TNEIQRNKWIXAVRLERNETNWTHCKNXTI 795
TNEI ++ + AV +E++E CK I
Sbjct: 183 TNEITEHRTVLAVNIEKSENETKTCKKYAI 212
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 27.1 bits (57), Expect = 0.20
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 706 TNEIQRNKWIXAVRLERNETNWTHCKNXTI 795
TNEI ++ + AV +E++E CK I
Sbjct: 183 TNEITEHRTVLAVNIEKSENETKTCKKYAI 212
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 27.1 bits (57), Expect = 0.20
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 706 TNEIQRNKWIXAVRLERNETNWTHCKNXTI 795
TNEI ++ + AV +E++E CK I
Sbjct: 183 TNEITEHRTVLAVNIEKSENETKTCKKYAI 212
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 27.1 bits (57), Expect = 0.20
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 129 PPATSLHTARDNTLTNPQTSLTLNELY 49
PP T R + + +P LTLNE+Y
Sbjct: 505 PPFTYASLIRQSIIESPDKQLTLNEIY 531
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 25.4 bits (53), Expect = 0.62
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 138 PLDPPATSLHTARDNTLTNPQTSLT 64
PL+P TS T RDN L N +LT
Sbjct: 118 PLEPDFTSDVTERDNHLVNAFKTLT 142
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -3
Query: 320 YVEPFLKC--NYFSIVLLFVVLQTLALNLKIDFPEINYNNNYSVFFC 186
Y L C N + I++L L L ++L+ID P N ++ +C
Sbjct: 102 YATCVLSCWTNIYYIIILAWALFYLLVSLRIDLPWRTCGNPWNTRYC 148
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -3
Query: 320 YVEPFLKC--NYFSIVLLFVVLQTLALNLKIDFPEINYNNNYSVFFC 186
Y L C N + I++L L L ++L+ID P N ++ +C
Sbjct: 155 YATCVLSCWTNIYYIIILAWALFYLLVSLRIDLPWRTCGNPWNTRYC 201
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 7.6
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +1
Query: 106 SVQGRSGGVKGILCPELYSQGSKWSAKQKNTEXXXXXXISGKSIFK 243
+ Q SG + I PE+YS+ K + ISG+ ++
Sbjct: 25 AAQDSSGRIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDRYE 70
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 7.6
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +1
Query: 106 SVQGRSGGVKGILCPELYSQGSKWSAKQKNTEXXXXXXISGKSIFK 243
+ Q SG + I PE+YS+ K + ISG+ ++
Sbjct: 25 AAQDSSGRIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDRYE 70
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 7.6
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +1
Query: 106 SVQGRSGGVKGILCPELYSQGSKWSAKQKNTEXXXXXXISGKSIFK 243
+ Q SG + I PE+YS+ K + ISG+ ++
Sbjct: 25 AAQDSSGRIFTICVPEIYSKECDEMKKDSAVKGIPVSCISGRDRYE 70
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,999
Number of Sequences: 438
Number of extensions: 5687
Number of successful extensions: 33
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -