Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_M02
(786 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 298 7e-82
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 54 2e-08
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 51 2e-07
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 50 4e-07
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 48 2e-06
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 44 2e-05
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 44 2e-05
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 44 3e-05
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 43 6e-05
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 41 2e-04
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch... 38 0.001
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 36 0.009
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 36 0.009
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 35 0.015
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 35 0.015
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 34 0.027
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 34 0.027
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 32 0.081
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 32 0.11
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 31 0.14
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 31 0.25
SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase Prp16|... 29 0.57
SPAC637.08 |||iron-sulfur cluster assembly ATPase Nbp35|Schizosa... 29 0.76
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 29 0.76
SPAC8C9.17c |spc34||DASH complex subunit Spc34|Schizosaccharomyc... 29 0.76
SPBC776.12c |hsk1||serine/threonine protein kinase Hsk1|Schizosa... 29 0.76
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 29 0.76
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 29 1.00
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 29 1.00
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 28 1.7
SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subuni... 28 1.7
SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog... 28 1.7
SPBC16H5.10c |prp43||ATP-dependent RNA helicase Prp43|Schizosacc... 27 2.3
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 27 3.0
SPCC1281.05 |rsc7||RSC complex subunit Rsc7|Schizosaccharomyces ... 27 3.0
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 27 3.0
SPAC2G11.11c |prh1||ATP-dependent RNA helicase Prh1|Schizosaccha... 27 4.0
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 27 4.0
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 26 5.3
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 7.0
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 26 7.0
SPBC18H10.10c |cwc16||complexed with Cdc5 protein Cwf16|Schizosa... 26 7.0
SPBC530.13 |||cyclin Ctk2|Schizosaccharomyces pombe|chr 2|||Manual 25 9.3
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 298 bits (731), Expect = 7e-82
Identities = 150/244 (61%), Positives = 183/244 (75%)
Frame = -3
Query: 769 YPEMXKMMGDFGLRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEPDEGSGQLPQLH 590
YP+ GDF L + G FSD+EI+VLLGENGTGKTTF + +A N + L
Sbjct: 353 YPDHVIEQGDFKLTIKSGGFSDAEIIVLLGENGTGKTTFCKWMAKNSD----------LK 402
Query: 589 ISYKPQKISPKSQGLVRSLLHDKIRDAYIHPQFLTDVMKPMKIEEIMDQEVQNLSGGELQ 410
IS KPQ I+PK QG VR L KIR A+++ +F ++V KP+ I+ I+DQEV NLSGGELQ
Sbjct: 403 ISMKPQTIAPKFQGTVRMLFLKKIRAAFLNGKFQSEVCKPLSIDNIIDQEVLNLSGGELQ 462
Query: 409 RVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEHDFIMATYL 230
RVA+ L LG PADVYLIDEPSAYLDSEQR++A+KVI+RFI+++++T F+VEHDFIMATYL
Sbjct: 463 RVAICLALGMPADVYLIDEPSAYLDSEQRIIASKVIRRFIVNSRKTAFIVEHDFIMATYL 522
Query: 229 ADRVIVFEGTPSSNATAHAPQSLLNGMNKFLELLGITFRRDPNNFRPRINKHASVKDIEQ 50
ADRVI+FEG PS +A + PQSLL GMN FL+ L +TFRRDPN RPRINK S D EQ
Sbjct: 523 ADRVILFEGQPSRDARCNPPQSLLTGMNTFLKNLDVTFRRDPNTLRPRINKFDSQMDQEQ 582
Query: 49 KRAG 38
K AG
Sbjct: 583 KNAG 586
Score = 104 bits (249), Expect = 2e-23
Identities = 74/216 (34%), Positives = 109/216 (50%), Gaps = 27/216 (12%)
Frame = -3
Query: 700 EILVLLGENGTGKTTFIRMLAGNLEPDEGSGQLPQLHISYKPQKISPKSQGLVRSLLHDK 521
++L L+G NG GK+T +++L+G ++P+ G P + Q ++ D
Sbjct: 104 QVLGLVGTNGIGKSTALKILSGKMKPNLGRYDNPPDWAEVVKYFRGSELQNFFTKVVEDN 163
Query: 520 IRDAYIHPQFLTDVMKPMK------------------IEEIMD---------QEVQNLSG 422
I+ A I PQ++ + + +K EE+MD +EV +LSG
Sbjct: 164 IK-ALIKPQYVDHIPRAIKTGDKTVSGLIKARANNNNFEEVMDHTDLQNLLNREVGHLSG 222
Query: 421 GELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEHDFIM 242
GELQR A+ + ADVY+ DEPS+YLD +QRL A +VI R +L VVEHD +
Sbjct: 223 GELQRFAIAAVATQKADVYMFDEPSSYLDIKQRLKAGRVI-RSLLATTNYVIVVEHDLSV 281
Query: 241 ATYLADRVIVFEGTPSSNATAHAPQSLLNGMNKFLE 134
YL+D V V G PS P S+ G+N FL+
Sbjct: 282 LDYLSDFVCVLYGVPSMYGVVTLPYSVREGINIFLD 317
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 54.0 bits (124), Expect = 2e-08
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 9/174 (5%)
Frame = -3
Query: 745 GDFGLRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEPDEGSGQLPQLH-ISYKPQK 569
GDF LR + F +++ +++G G+GK++ I L G L ++GS LP+ +SY Q
Sbjct: 627 GDFCLRDLNIVFPRNKLSIVIGPTGSGKSSLISALLGELSLNKGSYNLPRSKGVSYVSQV 686
Query: 568 ISPKSQGLVRSLLHD--KIRDAYIHP----QFLTDVMK--PMKIEEIMDQEVQNLSGGEL 413
++ + ++L D I + Y LTD+ + EI ++ V LSGG+
Sbjct: 687 PWLRNATIRDNILFDYPYIEERYKKVIQACGLLTDLQSFVASDLTEIGEKGV-TLSGGQK 745
Query: 412 QRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEHD 251
QR+AL + P + L+D+ + LD K + L RT +V H+
Sbjct: 746 QRIALARAVYSPTSIVLMDDVFSALDIHTSNWIYKHCFQSSLMENRTVILVTHN 799
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 51.2 bits (117), Expect = 2e-07
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
Frame = -3
Query: 706 DSEILVLLGENGTGKTTFIRMLAGNLEPDEG-SGQLPQLHISYKPQ------KISPKSQG 548
DS I V+ G NG GK+T +++L L P G + P+L I+Y Q ++ +
Sbjct: 544 DSRIGVV-GPNGAGKSTMLKLLIEQLHPTSGIVSRHPRLRIAYFAQHHVDTLDLNLNALS 602
Query: 547 LVRSLLHDKIRDAYIHPQFLTDVMKPMKIEEIMDQEVQNLSGGELQRVALVLCLG-KPAD 371
+ K + Y V P+ +++++ LSGG+ RVA CLG +
Sbjct: 603 FLAKTFPGKGEEEYRRHLGAFGVSGPLALQKMI-----TLSGGQKSRVAFA-CLGLQNPH 656
Query: 370 VYLIDEPSAYLDSEQRLVAAKVIKRF 293
+ ++DEP+ +LD E + +KRF
Sbjct: 657 ILILDEPTNHLDMESMDALTRAVKRF 682
Score = 32.3 bits (70), Expect = 0.081
Identities = 22/82 (26%), Positives = 36/82 (43%)
Frame = -3
Query: 460 EEIMDQEVQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHA 281
+E+ + SGG R++L L D+ L+DEPS LD + + + ++
Sbjct: 345 QEMQSHATKTFSGGWRMRLSLARALFCQPDLLLLDEPSNMLD----VPSIAFLSEYLQTY 400
Query: 280 KRTGFVVEHDFIMATYLADRVI 215
K VV HD +A +I
Sbjct: 401 KNIVLVVSHDRSFLNEVATDII 422
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 50.0 bits (114), Expect = 4e-07
Identities = 45/192 (23%), Positives = 86/192 (44%), Gaps = 10/192 (5%)
Frame = -3
Query: 703 SEILVLLGENGTGKTTFIRMLAGNLEPDEGSGQLPQL--HISYKPQKISPKSQGLVRSLL 530
++ +++G G+GK+T L G L G P + I+Y PQ ++ + ++L
Sbjct: 607 NQFTLVVGSTGSGKSTLAMALLGELHVISGKMTTPSISQRIAYVPQAAWLRNGTIRSNIL 666
Query: 529 HDKIRDAYIHPQFLTDVMKPMKIEEIMDQEV-------QNLSGGELQRVALVLCLGKPAD 371
+ D + Q + + + D ++ +LSGG+ QRV+L L A+
Sbjct: 667 FGEPYDEERYFQIIKACCLDSDLNSMNDGDLTYIHSNGSSLSGGQKQRVSLARALYSNAE 726
Query: 370 VYLIDEPSAYLD-SEQRLVAAKVIKRFILHAKRTGFVVEHDFIMATYLADRVIVFEGTPS 194
VY+ D+ + LD S R + +L K T + H+ + +A+ VIV + + +
Sbjct: 727 VYIFDDIFSALDVSTSRKIYESCFLSTLLQHK-TIILFTHNVSLCLPIAENVIVLKNSTA 785
Query: 193 SNATAHAPQSLL 158
+ + Q L+
Sbjct: 786 QLVSPDSIQELV 797
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 48.0 bits (109), Expect = 2e-06
Identities = 37/162 (22%), Positives = 78/162 (48%), Gaps = 1/162 (0%)
Frame = -3
Query: 688 LLGENGTGKTTFIRMLAGNLEPDEGSGQLPQLHISYKPQKISPKSQGLVRSLLHDKIRDA 509
L G NG+GK+T +R + N + + L +++ + + S V +L D
Sbjct: 465 LCGPNGSGKSTLMRAIV-NGQVEGFPTHLRTVYVEHDIDE-SEADTPSVDFILQDPAVPI 522
Query: 508 YIHPQFLTDVMKPMKIEEIMDQEVQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSE 329
+ + + + +E+++ + +LSGG ++AL + K D+ L+DEP+ +LD
Sbjct: 523 KDRDEIVKALKENSFTDELINMPIGSLSGGWKMKLALTRAMFKNPDILLLDEPTNHLD-- 580
Query: 328 QRLVAAKVIKRFILHAKR-TGFVVEHDFIMATYLADRVIVFE 206
+V ++ F+++ K + +V HD ++ +I +E
Sbjct: 581 --VVNVAWLENFLVNQKDVSSIIVSHDSGFLDHVVQAIIHYE 620
Score = 36.7 bits (81), Expect = 0.004
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = -3
Query: 460 EEIMDQEVQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRF 293
E + ++ LSGG+ ++ L C V ++DEP+ YLD + +K +K F
Sbjct: 894 ELVSHSRIKGLSGGQKVKLVLAACTWLRPHVIVLDEPTNYLDRDSLGALSKGLKNF 949
Score = 31.9 bits (69), Expect = 0.11
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -3
Query: 715 EFSDSEILVLLGENGTGKTTFIRMLAGNLEPDEG 614
+ S S + ++G NG GK+T I++L G L P G
Sbjct: 696 QVSLSSRIAVIGPNGAGKSTLIKVLTGELLPTVG 729
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 44.0 bits (99), Expect = 2e-05
Identities = 49/192 (25%), Positives = 80/192 (41%), Gaps = 20/192 (10%)
Frame = -3
Query: 769 YPEMXKMMGDFGLRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEPDEGSGQLPQLH 590
Y ++ D PG+ ++ L+GE+G GK+T +R+L + + GS +
Sbjct: 593 YDPRKPVLSDINFVAQPGK-----VIALVGESGGGKSTIMRILLRFFDVNSGSITIDDQD 647
Query: 589 ISYKPQKISPKSQGLV---RSLLHDKI--RDAYIHPQFLTD-VMKPMKIEEIMDQEVQ-- 434
I S G+V +L +D I Y P + + K +I D+ +Q
Sbjct: 648 IRNVTLSSLRSSIGVVPQDSTLFNDTILYNIKYAKPSATNEEIYAAAKAAQIHDRILQFP 707
Query: 433 ------------NLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFI 290
LSGGE QRVA+ + K + L+DE ++ LD+ + R
Sbjct: 708 DGYNSRVGERGLKLSGGEKQRVAVARAILKDPSIILLDEATSALDTNTERQIQAALNR-- 765
Query: 289 LHAKRTGFVVEH 254
L + RT V+ H
Sbjct: 766 LASGRTAIVIAH 777
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 44.0 bits (99), Expect = 2e-05
Identities = 37/166 (22%), Positives = 76/166 (45%), Gaps = 4/166 (2%)
Frame = -3
Query: 688 LLGENGTGKTTFIRMLAG-NLEPDEGSGQLPQLHISYKPQKISPKSQGLVRSLLHDK-IR 515
++G NG GK+T +R + +E ++ +++ Q S ++ + DK +
Sbjct: 475 VVGHNGCGKSTLLRAIGDYKVENFPSPDEVKTCFVAHSLQG-EDTSMAILDFVAQDKALL 533
Query: 514 DAYIHPQFLTDVMKPMKIE-EIMDQEVQNLSGGELQRVALVLCLGKPADVYLIDEPSAYL 338
+ Q D + + E+ + V +LSGG ++ L + + AD+ L+DEP+ +L
Sbjct: 534 TMNVTRQEAADALHSVGFTAEMQENPVASLSGGWKMKLELARAMLQKADILLLDEPTNHL 593
Query: 337 DSEQRLVAAKVIKRFILHAKR-TGFVVEHDFIMATYLADRVIVFEG 203
D + ++ ++ K T +V HD ++ +I +EG
Sbjct: 594 D----VANIAWLEAYLTSQKNITCLIVSHDSSFLDHVCTDIIHYEG 635
Score = 36.7 bits (81), Expect = 0.004
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -3
Query: 703 SEILVLLGENGTGKTTFIRMLAGNLEPDEGS-GQLPQLHISYKPQ 572
S + +LG NG GK+T I++L G + P EG + P L + Y Q
Sbjct: 719 SSRVAILGPNGAGKSTLIKVLIGEVIPQEGKVFKHPNLRVGYVAQ 763
Score = 32.7 bits (71), Expect = 0.061
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = -3
Query: 439 VQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSE 329
+ +LSGG+ +V + CL + ++DEP+ +LD +
Sbjct: 908 ISSLSGGQKVKVVIAACLWNNPQLLVLDEPTNFLDRD 944
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 43.6 bits (98), Expect = 3e-05
Identities = 55/232 (23%), Positives = 104/232 (44%), Gaps = 23/232 (9%)
Frame = -3
Query: 754 KMMGDFGLRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEPDEGSGQLPQLHI---- 587
K++ L V PG+F + +G +G GK+T I ++ + D G+ + +++
Sbjct: 1135 KVLRGLNLTVKPGQF-----VAFVGSSGCGKSTTIGLIERFYDCDNGAVLVDGVNVRDYN 1189
Query: 586 --SYKPQ--KISPKS---QGLVR-SLLHDKIRDAYIHPQFLTDVMKPMKIEEIM------ 449
Y+ Q +S + QG VR +++ +D + + + + K I E +
Sbjct: 1190 INDYRKQIALVSQEPTLYQGTVRENIVLGASKD--VSEEEMIEACKKANIHEFILGLPNG 1247
Query: 448 -----DQEVQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILH 284
Q+ +LSGG+ QR+A+ L + + L+DE ++ LDS V + +
Sbjct: 1248 YNTLCGQKGSSLSGGQKQRIAIARALIRNPKILLLDEATSALDSHSEKVVQEALN--AAS 1305
Query: 283 AKRTGFVVEHDFIMATYLADRVIVFEGTPSSNATAHAPQSLLNGMNKFLELL 128
RT + H + + AD + VF+G + A HA L+ ++ EL+
Sbjct: 1306 QGRTTVAIAHR-LSSIQDADCIFVFDGGVIAEAGTHA--ELVKQRGRYYELV 1354
Score = 36.3 bits (80), Expect = 0.005
Identities = 24/93 (25%), Positives = 42/93 (45%)
Frame = -3
Query: 430 LSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEHD 251
+SGG+ QR+A+ + + L+DE ++ LDS+ ++ K + RT V+ H
Sbjct: 568 MSGGQKQRIAIARAVISDPKILLLDEATSALDSKSEVLVQKALDN--ASRSRTTIVIAHR 625
Query: 250 FIMATYLADRVIVFEGTPSSNATAHAPQSLLNG 152
+ AD ++V +H LNG
Sbjct: 626 -LSTIRNADNIVVVNAGKIVEQGSHNELLDLNG 657
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 42.7 bits (96), Expect = 6e-05
Identities = 43/182 (23%), Positives = 91/182 (50%), Gaps = 17/182 (9%)
Frame = -3
Query: 700 EILVLLGENGTGKTTFIRMLAGNLEPDE---GSGQLPQLHISYKPQKIS-----PKSQG- 548
E + ++G +G+GK+T + +L ++ L + ++ +K++ P G
Sbjct: 1129 EKVAIVGISGSGKSTLVELLRKTYPSEDIYIDGYPLTNIDTNWLLKKVAIVDQKPHLLGS 1188
Query: 547 -LVRSLLHDKIRDAY-----IHPQFLTDVMK--PMKIEEIMDQEVQNLSGGELQRVALVL 392
++ SLL+ RD + ++T+V++ P ++ + + +N SGG++QR+A
Sbjct: 1189 TILESLLYGVDRDINSVMDALDKTYMTEVIQNLPNGLDTPLLEFSKNFSGGQIQRLAFAR 1248
Query: 391 CLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEHDFIMATYLADRVIV 212
L + + ++DE ++ LDS+ L+ K I+ + T ++ H + LADR+IV
Sbjct: 1249 ALLRNPRLLILDECTSALDSKSSLLLEKTIQ----NLSCTVLIITHQPSLMK-LADRIIV 1303
Query: 211 FE 206
+
Sbjct: 1304 MD 1305
Score = 42.3 bits (95), Expect = 8e-05
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 19/169 (11%)
Frame = -3
Query: 700 EILVLLGENGTGKTTFIRMLAGNLEPDEGSGQLPQLHISYKPQKISPKSQGLV--RSLLH 527
E++ ++G +G+GK+TFI +L P G+ L + + + + LV + ++
Sbjct: 463 ELVHIIGPSGSGKSTFISLLLRYFSPTYGNIYLDDFPLEEIDEHVLGSTITLVCQQPVIF 522
Query: 526 DK-------IRDAYIHPQFLTDVMKPMKIEEI---MDQEVQ------NLSGGELQRVALV 395
D +R+ +V + ++E DQ +LSGG+ QR+AL
Sbjct: 523 DMTIRENIIMRNENASESDFEEVCRLALVDEFALTFDQSYDTPCKEASLSGGQQQRIALA 582
Query: 394 LCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAK-RTGFVVEHD 251
L + ++ ++DEP++ LD + + I+ H K +T V+ HD
Sbjct: 583 RALLRDTEILILDEPTSALDPITKNLVMDAIR---AHRKGKTTLVITHD 628
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 40.7 bits (91), Expect = 2e-04
Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 13/148 (8%)
Frame = -3
Query: 706 DSEILVLLGENGTGKTTFIRMLAGNLEPDEGSGQLPQLHISYKPQKISPKSQGLVRSLLH 527
DS + ++ G+NGTGK+T + ++ G L P EG+ Y K++ SQ L +
Sbjct: 416 DSRVAIV-GKNGTGKSTLLNLITGLLIPIEGNVS------RYSGLKMAKYSQHSADQLPY 468
Query: 526 DK-----IRDAYIHPQF-------LTDVMKPMKIEEI-MDQEVQNLSGGELQRVALVLCL 386
DK I D Y P+F V+ + + E++ LS G RV
Sbjct: 469 DKSPLEYIMDTY-KPKFPERELQQWRSVLGKFGLSGLHQTSEIRTLSDGLKSRVVFAALA 527
Query: 385 GKPADVYLIDEPSAYLDSEQRLVAAKVI 302
+ + L+DEP+ +LD AK I
Sbjct: 528 LEQPHILLLDEPTNHLDITSIDALAKAI 555
Score = 33.5 bits (73), Expect = 0.035
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = -3
Query: 460 EEIMDQEVQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSE 329
+E+M + +++SGG RVAL L + L+DEP+ +LD E
Sbjct: 211 QEMMAKPTKDMSGGWRMRVALSRALFIKPSLLLLDEPTNHLDLE 254
>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
ATPase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 726
Score = 38.3 bits (85), Expect = 0.001
Identities = 21/73 (28%), Positives = 38/73 (52%)
Frame = -3
Query: 430 LSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEHD 251
LSGG+ QR+A+ L + ++DE ++ LD E ++ K I+ + + T + H
Sbjct: 620 LSGGQKQRIAIARALLRNPAFLILDEATSALDGEAEVMVDKTIQSLMHNRSMTTITIAHK 679
Query: 250 FIMATYLADRVIV 212
+ AD++IV
Sbjct: 680 -LATIRRADQIIV 691
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 35.5 bits (78), Expect = 0.009
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = -3
Query: 445 QEVQNLSGGE--LQRVALVLCLG--KPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAK 278
+ + NLSGGE L +ALV L KP +Y++DE A LD + + A IK K
Sbjct: 1225 KNISNLSGGEKTLSSLALVFALHNYKPTPLYVMDEIDAALDFKNVSIVANYIKE---RTK 1281
Query: 277 RTGFVV 260
F+V
Sbjct: 1282 NAQFIV 1287
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 35.5 bits (78), Expect = 0.009
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = -3
Query: 469 MKIEEIMDQEVQNLSGGELQRVALVLCLG----KPADVYLIDEPSAYLDSEQRLVAAKVI 302
+KI I + LSGG+ VAL L + KPA +Y++DE A LD ++I
Sbjct: 1073 VKIGSIWKDSLAELSGGQRSLVALALIMSLLKYKPAPMYILDEIDAALDLSHTQNIGRLI 1132
Query: 301 K 299
K
Sbjct: 1133 K 1133
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 34.7 bits (76), Expect = 0.015
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = -3
Query: 703 SEILVLLGENGTGKTTFIRMLAGNL 629
+E L+L+GE GTGKTT I++LAG L
Sbjct: 467 NEPLLLVGETGTGKTTTIQLLAGLL 491
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1465
Score = 34.7 bits (76), Expect = 0.015
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 7/164 (4%)
Frame = -3
Query: 706 DSEILVLLGENGTGKTTFIRMLAGNLEPDEGSG-QLPQLHISYKPQKI---SPKSQGLVR 539
+ E+ + G+ G GK++ + GN+ + GS Q L + + I + + L
Sbjct: 606 NGELTCIFGKVGAGKSSLLEACMGNMYKNSGSVFQCGSLAYAAQQPWIFDATIRENILFG 665
Query: 538 SLLHDKIRDAYIHPQFLT---DVMKPMKIEEIMDQEVQNLSGGELQRVALVLCLGKPADV 368
S ++ + IH L ++ E+ Q+ +LSGG+ R++L + AD+
Sbjct: 666 SEFDPELYEKTIHACCLKRDFEIFTEGDQTEV-GQKGASLSGGQKSRISLARAIYSQADI 724
Query: 367 YLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVVEHDFIMAT 236
YL+D+ L S + V+ +IK GF+ H ++ T
Sbjct: 725 YLLDD---VLSSVDQHVSRDLIKNLF---GPEGFLRTHCVVLTT 762
Score = 31.5 bits (68), Expect = 0.14
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 21/199 (10%)
Frame = -3
Query: 739 FGLRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEPDEGSGQLP------------Q 596
F L + E S E + ++G G GK+T L +EP EG ++ +
Sbjct: 1241 FALNNINIEISPREKIGIVGRTGAGKSTLAMALFRIIEPTEGKIEIDNEDITKFGLYDLR 1300
Query: 595 LHISYKPQKISPKSQGLVRSLL--HDKIRDAYIHPQFLTDVMKP--MKIEEIMDQEV--- 437
+S PQ+ S +G +R L + ++ D I +K ++E+ + V
Sbjct: 1301 SRLSIIPQE-SQIFEGNIRENLDPNHRLTDKKIWEVLEIASLKNCISQLEDGLYSRVAEG 1359
Query: 436 -QNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVI-KRFILHAKRTGFV 263
N S G+ Q + L L + L+DE +A + +E + + I KRF RT
Sbjct: 1360 GANFSSGQRQLICLARVLLTSTRILLLDEATASVHAETDAIVQQTIRKRF---KDRTILT 1416
Query: 262 VEHDFIMATYLADRVIVFE 206
V H I +DR++V +
Sbjct: 1417 VAHR-INTVMDSDRILVLD 1434
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 33.9 bits (74), Expect = 0.027
Identities = 38/172 (22%), Positives = 66/172 (38%), Gaps = 28/172 (16%)
Frame = -3
Query: 715 EFSDSEILVLLGENGTGKTTFIRMLAGNLEPD----------EGSGQLPQLHISYKPQKI 566
E + + ++G G+G+TTF+R + G+ P +G P I K
Sbjct: 26 ELARKQNWAIIGNTGSGRTTFLRCIQGSFTPSPSTSFSYPFLKGKSDSPWQAIQLLDFKS 85
Query: 565 SPKSQGLVRSLLHDKIRD-------------AY-----IHPQFLTDVMKPMKIEEIMDQE 440
S + + S + RD AY Q + + ++ ++
Sbjct: 86 SGQQRAAYYSERYHSFRDKEHDTTLEKWLLGAYRGNEKFASQHVQEAASMTQLSHLLPSS 145
Query: 439 VQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILH 284
+ NLS G+ +R L L + + L+DEP A LD R V + ++ H
Sbjct: 146 LINLSNGQSRRAMLASKLVQRPQLLLLDEPYAGLDVTSRSVLSSLLGEMSNH 197
Score = 25.4 bits (53), Expect = 9.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 706 DSEILVLLGENGTGKTTFIRMLAGN 632
+ E L G NG+GKTT + + G+
Sbjct: 289 EGERWALTGSNGSGKTTLLAYVVGD 313
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 33.9 bits (74), Expect = 0.027
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = -3
Query: 409 RVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFI-LHAKRTGF---VVEHD 251
R+AL CLG + +DEP+ LD E AK + R + K+ F V+ HD
Sbjct: 1195 RLALAECLGVNCGILALDEPTTNLDEENICSLAKNLSRIVEFRRKQANFQLIVITHD 1251
Score = 27.1 bits (57), Expect = 3.0
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -3
Query: 703 SEILVLLGENGTGKTTFIRML 641
S + +++G+NG+GKTT I L
Sbjct: 27 SPLTLIVGQNGSGKTTIIECL 47
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 32.3 bits (70), Expect = 0.081
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -3
Query: 694 LVLLGENGTGKTTFIRMLAGNLEPDEGS 611
+ L+G NG GKTT I+++ ++P GS
Sbjct: 623 VALVGPNGAGKTTLIKLILEKVQPSTGS 650
Score = 31.1 bits (67), Expect = 0.19
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -3
Query: 460 EEIMDQEVQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSE 329
+E++ + LSGG R+AL L + ++DEP+ +LD E
Sbjct: 411 DEMIAKRTNELSGGWRMRIALARILFIKPTLMMLDEPTNHLDLE 454
Score = 26.2 bits (55), Expect = 5.3
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 688 LLGENGTGKTTFIRMLAGNLEPDEGSGQLPQLHISYKPQKIS 563
L+ NG+GK+T + +A L P S L Y P +++
Sbjct: 306 LIAPNGSGKSTLLHAIACGLIPTPSSLDFYLLDREYIPNELT 347
Score = 25.4 bits (53), Expect = 9.3
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = -3
Query: 430 LSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFV-VEH 254
LS G+ +RV + L+DEP+ LD + A + F G V + H
Sbjct: 713 LSDGQRRRVLFAFLGMTQPHILLLDEPTNALDIDTIDALADALNNF-----DGGVVFITH 767
Query: 253 DFIMATYLADRV-IVFEGT 200
DF + +A+ + IV GT
Sbjct: 768 DFRLIDQVAEEIWIVQNGT 786
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 31.9 bits (69), Expect = 0.11
Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = -3
Query: 694 LVLLGENGTGKTTFI-RMLAGNLE 626
LVL+G+ GTGKTTF+ R L G E
Sbjct: 12 LVLVGDGGTGKTTFVKRHLTGEFE 35
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 31.5 bits (68), Expect = 0.14
Identities = 30/129 (23%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Frame = -3
Query: 700 EILVLLGENGTGKTTFIRMLAGNLEPDEGSGQLPQLHISYKPQKISPKSQGLVRSLLHDK 521
E+ ++G+ G GK++ + GN++ GS I+Y Q+ + + ++L
Sbjct: 610 ELCCIVGKVGMGKSSLLEACLGNMQKHSGS-VFRCGSIAYAAQQPWILNATIQENILFGL 668
Query: 520 IRDAYIHPQFLTD--VMKPMKIEEIMDQ-EVQ----NLSGGELQRVALVLCLGKPADVYL 362
D + + + +++ +I DQ EV +LSGG+ R++L + +D+YL
Sbjct: 669 ELDPEFYEKTIRACCLLRDFEILADGDQTEVGEKGISLSGGQKARISLARAVYSRSDIYL 728
Query: 361 IDEPSAYLD 335
+D+ + +D
Sbjct: 729 LDDILSAVD 737
Score = 31.5 bits (68), Expect = 0.14
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -3
Query: 433 NLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIK 299
NLS G+ Q + L L P V L+DE +A +D E + + I+
Sbjct: 1360 NLSSGQRQLMCLTRALLTPTRVLLLDEATAAVDVETDAIVQRTIR 1404
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 700 EILVLLGENGTGKTTFIRMLAGNLEPDEGSGQLPQLHIS 584
E + ++G G GK+T L +EP G QL ++I+
Sbjct: 1252 EKIGIVGRTGAGKSTLTLALFRLIEPTSGDIQLDDINIT 1290
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 30.7 bits (66), Expect = 0.25
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -3
Query: 709 SDSEILVLLGENGTGKTTFI 650
S ++ILVLLGE G+GKTT I
Sbjct: 524 SKNQILVLLGETGSGKTTQI 543
>SPBC1711.17 |prp16|SPBC17G9.01|ATP-dependent RNA helicase
Prp16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 29.5 bits (63), Expect = 0.57
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -3
Query: 769 YPEMXKMMGDFGLRV-MPGEFSDSEILVLLGENGTGKTT 656
Y E + + F +R + D+++L+++GE G+GKTT
Sbjct: 485 YREQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTT 523
>SPAC637.08 |||iron-sulfur cluster assembly ATPase
Nbp35|Schizosaccharomyces pombe|chr 1|||Manual
Length = 317
Score = 29.1 bits (62), Expect = 0.76
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 700 EILVLLGENGTGKTTFIRMLAGNLEPDE 617
+ILVL G+ G GK+TF LA L +E
Sbjct: 62 KILVLSGKGGVGKSTFSSQLAWGLSLEE 89
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 29.1 bits (62), Expect = 0.76
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 22/146 (15%)
Frame = -3
Query: 700 EILVLLGENGTGKTTFIRMLAGNLEPDEGSGQLP----------QLHISYKPQKISPKSQ 551
++ L+GE+G GKTT + +LA ++ +G + Q Y Q+ +
Sbjct: 912 KLTALMGESGAGKTTLLNVLAQRVDTGVVTGDMLVNGRGLDSTFQRRTGYVQQQDVHIGE 971
Query: 550 GLVRSLLH--DKIRDAYIHP-----QFLTDVMKPMKIEEIMDQEVQNLSGG----ELQRV 404
VR L +R P +++ V+K +++E + + G + +R
Sbjct: 972 STVREALRFSAALRQPASVPLSEKYEYVESVIKLLEMESYAEAIIGTPGSGLNVEQRKRA 1031
Query: 403 AL-VLCLGKPADVYLIDEPSAYLDSE 329
+ V KPA + +DEP++ LDS+
Sbjct: 1032 TIGVELAAKPALLLFLDEPTSGLDSQ 1057
>SPAC8C9.17c |spc34||DASH complex subunit Spc34|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 164
Score = 29.1 bits (62), Expect = 0.76
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Frame = -3
Query: 523 KIRDAYIHPQFLTDVMKPMKIEEIMDQEVQNLSGGELQRVA------LVLCLGKPADVYL 362
+ DA +H +TD+++ + EE++ E ++L +R+A V C+ + D+Y
Sbjct: 28 RFTDAVLHTHAITDLIRDTQKEELIAAEFKSLPKDWSERLASENPADYVACIEELLDIYP 87
Query: 361 IDEPSAYLDS 332
+ YL++
Sbjct: 88 MQGGREYLET 97
>SPBC776.12c |hsk1||serine/threonine protein kinase
Hsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 507
Score = 29.1 bits (62), Expect = 0.76
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 195 EGVPSNTITRSARYVAIIKSCSTTKPVRLAWRMNLLITL 311
E +P N +R +YVAI K +T+ P R+ + +L L
Sbjct: 112 EKIPVNEDSRKPKYVAIKKIYATSSPARIYNELEILYLL 150
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 29.1 bits (62), Expect = 0.76
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -3
Query: 361 IDEPSAYLDSEQ---RLVAAKVIKRFILHAKRTGFVVEHDFIMATY 233
ID S LDS R A V+ IL+ + TGF +DFI AT+
Sbjct: 965 IDYDSPELDSVYEGVRTTIAVVLSDLILNVEPTGFSFVYDFIRATF 1010
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 28.7 bits (61), Expect = 1.00
Identities = 13/27 (48%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = -3
Query: 694 LVLLGENGTGKTTFIRML-AGNLEPDE 617
++L G +GTGKTTF L A +L+P++
Sbjct: 33 IMLCGASGTGKTTFFNTLFATSLQPEK 59
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 28.7 bits (61), Expect = 1.00
Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 10/129 (7%)
Frame = -3
Query: 691 VLLGENGTGKTTFIRMLAGNLEPDEG----SGQLPQLHISYKPQKISPKSQGLVRSLLHD 524
+L+G NG GK+T +++L+G G G+ P S + ++ + ++H
Sbjct: 34 LLVGANGAGKSTLLKLLSGKSLAKAGHISVGGKDPFRESS--SAFVYLGTEWVNNPVIHR 91
Query: 523 KIRDAYIHPQFLTDVMKPMK--IEEIMDQEVQ----NLSGGELQRVALVLCLGKPADVYL 362
+ A + D + + I+D +++ +S GE +RV L + L +P +V L
Sbjct: 92 DMSVARLIASVGGDKFAERRDFLISILDIDLRWRMHAVSDGERRRVQLCMGLLRPFEVLL 151
Query: 361 IDEPSAYLD 335
+DE + LD
Sbjct: 152 LDEVTVDLD 160
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 691 VLLGENGTGKTTFIRMLAGNLEPD 620
+L G G+GKT+F+ LAG L+ D
Sbjct: 246 LLYGPPGSGKTSFLYALAGELDYD 269
>SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subunit
Orc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 707
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -3
Query: 694 LVLLGENGTGKTTFIRMLAGNLEPDEGSGQLPQ 596
L + G GTGKT + + NL+ GQLP+
Sbjct: 364 LYISGTPGTGKTATVHEVIWNLQELSREGQLPE 396
>SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 982
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 715 EFSDSEILVLLGENGTGKTTFIRML 641
E SE+L++ G N GK+T+IR +
Sbjct: 710 EHGSSELLIITGPNMGGKSTYIRQV 734
>SPBC16H5.10c |prp43||ATP-dependent RNA helicase
Prp43|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 27.5 bits (58), Expect = 2.3
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = -3
Query: 712 FSDSEILVLLGENGTGKTTFI 650
+ +++I+V +GE G+GKTT I
Sbjct: 88 YHENQIIVFVGETGSGKTTQI 108
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 724 MPGEFSDSEILVLLGENGTGKTTFIRMLAGNL 629
+ G S + ++L+G G GKTT +++A L
Sbjct: 856 LKGSISKNASIILIGMRGAGKTTIGKIIAKQL 887
>SPCC1281.05 |rsc7||RSC complex subunit Rsc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 390
Score = 27.1 bits (57), Expect = 3.0
Identities = 32/142 (22%), Positives = 62/142 (43%), Gaps = 10/142 (7%)
Frame = -3
Query: 628 EPDEGSGQLPQLHISYKPQKISPKSQGLVRSLLHDKIRDAYIHPQFLTD------VMKPM 467
+ +E SG+ + + + +P+ +P S V +D Y H L D V+ P
Sbjct: 40 DDEEYSGRTRRRNRNTRPRVSAPSSSSTVVP------KDLYSHRATLEDDELNFGVVDPE 93
Query: 466 KIEEIMDQEVQNLSGGELQRVALVLCLGKPADVYLID-EPS---AYLDSEQRLVAAKVIK 299
+++ E+ L+GG R CLG+ +Y++ EP+ Y DS + + +
Sbjct: 94 GEKKV--NELGYLNGGREYRCRTFTCLGRGNRLYMLSTEPARAMGYRDSYLLFLKHRSLH 151
Query: 298 RFILHAKRTGFVVEHDFIMATY 233
+ I+ ++E + I +Y
Sbjct: 152 KIIVDDSEKWDLIERNIIPHSY 173
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 293 ESFNYFSCYQTLFRIQVS*RFINKVNVSRFTKTQHESY 406
E F Y++ L + ++ NK+ VS+FT QH Y
Sbjct: 558 EIFEYYNKPWNLLVLYSLLQYENKLTVSQFTAMQHSEY 595
>SPAC2G11.11c |prh1||ATP-dependent RNA helicase
Prh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 719
Score = 26.6 bits (56), Expect = 4.0
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = -3
Query: 715 EFSDSEILVLLGENGTGKTTFI 650
+ D+ ++V++GE G+GK+T I
Sbjct: 108 QIQDNRVIVVVGETGSGKSTQI 129
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -3
Query: 769 YPEMXKMMGDFGLRVMPGEFSDSEILVLLGENGTGKTTFIRMLA 638
Y +++G+ G+ E ++L G GTGKTT R++A
Sbjct: 98 YVGQEELVGERGIIRNLIEQDRCNSMILWGSAGTGKTTLARLIA 141
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 26.2 bits (55), Expect = 5.3
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 630 RFPANILINVVFPVPFSPSNTKISESENSPGITRNPKSPI 749
RF + P P SPSN+K SEN +N SPI
Sbjct: 162 RFSISESAGAAAPTP-SPSNSKSPPSENRKNRLQNVLSPI 200
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 7.0
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 694 LVLLGENGTGKTTFIRML 641
L+L GE+G GKTTF L
Sbjct: 31 LMLCGESGLGKTTFCNTL 48
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 25.8 bits (54), Expect = 7.0
Identities = 36/163 (22%), Positives = 75/163 (46%), Gaps = 22/163 (13%)
Frame = -3
Query: 718 GEFSDSEILVLLGENGTGKTTFIRML-----AGNLEPDEGSGQLP-----QLHISYKPQK 569
G + + LLGEN +GK+ +R+L AG++E + L + I Y +
Sbjct: 782 GYLKKNTLTALLGENKSGKSVLLRILSQRGIAGSVEGEITLSGLKNPKNLRKRIGYVRKN 841
Query: 568 ISPKSQGLVRSL--LHDKIR--------DAYIHPQFLTDVMKPMKIEE-IMDQEVQNLSG 422
S+ VR LH +R + Y + +++ D + ++ + I+ + LS
Sbjct: 842 PLFISEYTVRETLRLHAALRQSKQRSLSEQYAYVEYVIDFLGLGEVADFIVGDMGKGLSL 901
Query: 421 GELQRVALVLCL-GKPADVYLIDEPSAYLDSEQRLVAAKVIKR 296
+ +++ + L +P + L+DEP+ LDS+ + ++++
Sbjct: 902 YHKRLLSIAVELSARPGSILLLDEPANGLDSQSAWMLVCILQK 944
>SPBC18H10.10c |cwc16||complexed with Cdc5 protein
Cwf16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 294
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 727 VMPGEFSDSEILVLLGENGTGKTTFIRML 641
++P SD + +LL +N GK FIR L
Sbjct: 191 ILPPSSSDKDKALLLLDNELGKNKFIRKL 219
>SPBC530.13 |||cyclin Ctk2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 25.4 bits (53), Expect = 9.3
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = -3
Query: 199 PSSNATAHAPQSLLNGMNKFLELLGITFR-RDPNNFRPRINK 77
P S AH+ + +L LEL+ FR R P+N+ + K
Sbjct: 114 PGSEVDAHSQKRILGLERMTLELICFDFRVRHPHNYMVKFAK 155
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,343,923
Number of Sequences: 5004
Number of extensions: 70902
Number of successful extensions: 295
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 289
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 381366860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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