Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_M02
(786 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 37 8e-04
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 33 0.013
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 31 0.031
U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette... 30 0.093
U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette... 30 0.093
U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette... 30 0.093
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 29 0.22
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 27 0.87
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 25 2.0
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 25 2.7
DQ182016-1|ABA56308.1| 353|Anopheles gambiae G(alpha)i protein. 25 3.5
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 24 6.1
DQ182015-1|ABA56307.1| 353|Anopheles gambiae G(alpha)q2 protein. 23 8.1
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 36.7 bits (81), Expect = 8e-04
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Frame = -3
Query: 439 VQNLSGGE--LQRVALVLCLG--KPADVYLIDEPSAYLDSEQRLVAAKVIK------RFI 290
+ NLSGGE L +ALV L KP+ +Y++DE A LD + + A IK +FI
Sbjct: 1184 ISNLSGGEKTLSSLALVFALHYYKPSPLYVMDEIDAALDFKNVSIVAHYIKERTKNAQFI 1243
Query: 289 LHAKRTGFVVEHDFIMATY 233
+ + R+ D+++ Y
Sbjct: 1244 IISLRSNMFELSDYLVGIY 1262
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 32.7 bits (71), Expect = 0.013
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = -3
Query: 445 QEVQNLSGGELQRVALVLCLG----KPADVYLIDEPSAYLDSEQRLVAAKVI 302
+E+ LSGG+ VAL L PA YL DE LD++ R A +I
Sbjct: 1094 REMNQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRSAVADMI 1145
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 31.5 bits (68), Expect = 0.031
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = -3
Query: 445 QEVQNLSGGELQRVALVLCLG----KPADVYLIDEPSAYLD 335
+ + LSGG+ VAL L L KPA +Y++DE A LD
Sbjct: 1078 ESLTELSGGQRSLVALSLILAMLKYKPAPLYILDEVDAALD 1118
>U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 29.9 bits (64), Expect = 0.093
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = -3
Query: 439 VQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVV 260
++ LSGGE +R+A + L DEP++ LDS +V+K + K +
Sbjct: 241 IKGLSGGERKRLAFASETLTDPHLLLCDEPTSGLDSFMAHSVLQVLKGMAMKGKTIILTI 300
Query: 259 EHDFIMATYLADRV-IVFEG 203
L D++ +V EG
Sbjct: 301 HQPSSELYCLFDKILLVAEG 320
Score = 29.5 bits (63), Expect = 0.12
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 733 LRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEP 623
L+ + G E+L ++G +G GKTT + LA P
Sbjct: 116 LKNVTGVAKSGELLAVMGSSGAGKTTLLNALAFRSPP 152
>U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 29.9 bits (64), Expect = 0.093
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = -3
Query: 439 VQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVV 260
++ LSGGE +R+A + L DEP++ LDS +V+K + K +
Sbjct: 241 IKGLSGGERKRLAFASETLTDPHLLLCDEPTSGLDSFMAHSVLQVLKGMAMKGKTIILTI 300
Query: 259 EHDFIMATYLADRV-IVFEG 203
L D++ +V EG
Sbjct: 301 HQPSSELYCLFDKILLVAEG 320
Score = 29.5 bits (63), Expect = 0.12
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 733 LRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEP 623
L+ + G E+L ++G +G GKTT + LA P
Sbjct: 116 LKNVTGVAKSGELLAVMGSSGAGKTTLLNALAFRSPP 152
>U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 673
Score = 29.9 bits (64), Expect = 0.093
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = -3
Query: 439 VQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVIKRFILHAKRTGFVV 260
++ LSGGE +R+A + L DEP++ LDS +V+K + K +
Sbjct: 219 IKGLSGGERKRLAFASETLTDPHLLLCDEPTSGLDSFMAHSVLQVLKGMAMKGKTIILTI 278
Query: 259 EHDFIMATYLADRV-IVFEG 203
L D++ +V EG
Sbjct: 279 HQPSSELYCLFDKILLVAEG 298
Score = 29.5 bits (63), Expect = 0.12
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 733 LRVMPGEFSDSEILVLLGENGTGKTTFIRMLAGNLEP 623
L+ + G E+L ++G +G GKTT + LA P
Sbjct: 94 LKNVTGVAKSGELLAVMGSSGAGKTTLLNALAFRSPP 130
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 28.7 bits (61), Expect = 0.22
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = -3
Query: 445 QEVQNLSGGELQRVALVLCLG----KPADVYLIDEPSAYLDS 332
Q + NLSGGE AL L +PA +++DE A LD+
Sbjct: 1123 QPMSNLSGGEKTIAALALLFAIHSFQPAPFFVLDEIDAALDN 1164
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
Length = 2051
Score = 26.6 bits (56), Expect = 0.87
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Frame = -3
Query: 712 FSDSEILVLLGENGTGKTTFIRMLAG-------NLEPDEGSGQLPQLHISYKPQKISPK 557
F + E + +L +G F++ + G N++ +LP ++I+ KPQ+I K
Sbjct: 1716 FGEDEQITILARHGEDNQLFLKAILGQYKQNDYNIDIIPHGHELPMVYINGKPQQIHEK 1774
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 25.4 bits (53), Expect = 2.0
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 213 TITRSARYVAI-IKSCSTTKPVRLAWRMNLLITLA 314
T R+ R + I CSTT RL WR++ +TL+
Sbjct: 157 TFNRNKRTSIVDITFCSTTLSERLNWRVSDALTLS 191
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 25.0 bits (52), Expect = 2.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 205 GTPSSNATAHAPQSLLNGMNKFLELL 128
G P +++ P +LNG+ K LE L
Sbjct: 501 GKPPGESSSFRPLGMLNGLGKVLERL 526
>DQ182016-1|ABA56308.1| 353|Anopheles gambiae G(alpha)i protein.
Length = 353
Score = 24.6 bits (51), Expect = 3.5
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 718 GEFSDSEI-LVLLGENGTGKTTFIRMLAGNLEPDEGSGQLPQLHISYKPQKISPKSQGLV 542
GE + SE+ L+LLG +GK+T ++ + E + Q Y+P S QGL+
Sbjct: 26 GERAASEVKLLLLGAGESGKSTIVKQMKIIHETGYSQEECEQ----YRPVVYSNTIQGLM 81
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 23.8 bits (49), Expect = 6.1
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 437 DFLVHNFFNFHWLHHISE 490
D L+H+F WLH + +
Sbjct: 764 DLLIHHFRQLVWLHRVRD 781
>DQ182015-1|ABA56307.1| 353|Anopheles gambiae G(alpha)q2 protein.
Length = 353
Score = 23.4 bits (48), Expect = 8.1
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 694 LVLLGENGTGKTTFIRML 641
L+LLG +GK+TFI+ +
Sbjct: 36 LLLLGTGESGKSTFIKQM 53
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 829,329
Number of Sequences: 2352
Number of extensions: 17376
Number of successful extensions: 40
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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