Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_M02
         (786 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    25   0.60 
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    24   1.4  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    24   1.4  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    24   1.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    24   1.8  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   3.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   3.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   4.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   4.3  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 12/59 (20%), Positives = 30/59 (50%)
 Frame = -3

Query: 478  MKPMKIEEIMDQEVQNLSGGELQRVALVLCLGKPADVYLIDEPSAYLDSEQRLVAAKVI 302
            ++  +++ ++  + Q++    +QR+   +  GKP  V +   P      +Q+ + AKV+
Sbjct: 1061 IQQQQLKRVVTNQQQSIQTSGMQRIIAQIG-GKPIAVQIQQSPHQQQQQQQQKILAKVL 1118


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +3

Query: 192 DEGVPSNTITRSARYVAIIKSCSTTKPVRLAWRMN 296
           DEG    + + ++    +IK+ + T P++++WR N
Sbjct: 221 DEGTLRKSPSLTSLNAYLIKNQTITCPIKVSWRGN 255


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +3

Query: 192 DEGVPSNTITRSARYVAIIKSCSTTKPVRLAWRMN 296
           DEG    + + ++    +IK+ + T P++++WR N
Sbjct: 272 DEGTLRKSPSLTSLNAYLIKNQTITCPIKVSWRGN 306


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +3

Query: 192 DEGVPSNTITRSARYVAIIKSCSTTKPVRLAWRMN 296
           DEG    + + ++    +IK+ + T P++++WR N
Sbjct: 221 DEGTLRKSPSLTSLNAYLIKNQTITCPIKVSWRGN 255


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 400 LVLCLGKPADVYLIDEPSAYLD 335
           LV+CL  P DV +I   + Y+D
Sbjct: 89  LVICLIDPRDVEIILSSNVYID 110


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/33 (27%), Positives = 20/33 (60%)
 Frame = +3

Query: 192 DEGVPSNTITRSARYVAIIKSCSTTKPVRLAWR 290
           DEG    + + ++    +IK+ + T P++++WR
Sbjct: 221 DEGTLRKSPSLTSLNAYLIKNQTITCPIKVSWR 253


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +2

Query: 215 DYSIS*ICCHYKVVLDNKTSAFGMEDESFNYFSCYQTLFRIQVS*RFINKVN 370
           DY IS I   ++ +L   TS FG  D   N  +  Q L+ ++++  +IN  N
Sbjct: 505 DYDISNI--EHEALLLVITSTFGNGDPPENGEAFAQNLYAMKMNETYINSGN 554


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -3

Query: 718  GEFSDSEILVLLGENGTGKTTFIRMLAGNLEPDEG 614
            G  S S +  LL      +TTF+    GN+ P  G
Sbjct: 1842 GRSSRSSLRTLLPPISVAETTFVGGNQGNVVPGNG 1876


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -3

Query: 718  GEFSDSEILVLLGENGTGKTTFIRMLAGNLEPDEG 614
            G  S S +  LL      +TTF+    GN+ P  G
Sbjct: 1838 GRSSRSSLRTLLPPISVAETTFVGGNQGNVVPGNG 1872


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,455
Number of Sequences: 438
Number of extensions: 4692
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)