Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_L22
         (619 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF135118-1|AAD31714.1| 3367|Drosophila melanogaster laminin alph...    35   0.077
AE014134-2477|AAF53381.2| 2731|Drosophila melanogaster CG15288-P...    35   0.077
AE014134-2476|AAN10875.1| 3375|Drosophila melanogaster CG15288-P...    35   0.077

>AF135118-1|AAD31714.1| 3367|Drosophila melanogaster laminin
           alpha1,2 protein.
          Length = 3367

 Score = 35.1 bits (77), Expect = 0.077
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = +1

Query: 373 YLHNVLNNYNGRIEMIWSWDILRWDRT 453
           YL N L +Y  R++++ SWD++R DR+
Sbjct: 667 YLGNRLTSYGSRLQLVLSWDVIRGDRS 693


>AE014134-2477|AAF53381.2| 2731|Drosophila melanogaster CG15288-PA,
           isoform A protein.
          Length = 2731

 Score = 35.1 bits (77), Expect = 0.077
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = +1

Query: 373 YLHNVLNNYNGRIEMIWSWDILRWDRT 453
           YL N L +Y  R++++ SWD++R DR+
Sbjct: 667 YLGNRLTSYGSRLQLVLSWDVIRGDRS 693


>AE014134-2476|AAN10875.1| 3375|Drosophila melanogaster CG15288-PB,
           isoform B protein.
          Length = 3375

 Score = 35.1 bits (77), Expect = 0.077
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = +1

Query: 373 YLHNVLNNYNGRIEMIWSWDILRWDRT 453
           YL N L +Y  R++++ SWD++R DR+
Sbjct: 667 YLGNRLTSYGSRLQLVLSWDVIRGDRS 693


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,086,557
Number of Sequences: 53049
Number of extensions: 363848
Number of successful extensions: 718
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2538517050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)