Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_L21
         (777 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0364 + 13007002-13007538,13007965-13008393,13008649-130089...    29   3.1  
02_01_0668 - 4969141-4970520,4970597-4971463                           29   4.1  
11_06_0440 - 23567567-23567952,23568192-23569875,23583064-23584215     28   9.5  

>05_03_0364 +
           13007002-13007538,13007965-13008393,13008649-13008990,
           13009904-13010035,13010432-13010596
          Length = 534

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -1

Query: 609 VVSLVRSLHKTESFCHLWCLKLTDSFCKRRNNDLILIHVIG*VRSIL 469
           ++  + +LH+  SF   W  + T S  KRR  DL+ I   G V+  L
Sbjct: 340 MIPAIANLHQPASFWETWA-EDTTSILKRRTPDLVAIKETGRVKQAL 385


>02_01_0668 - 4969141-4970520,4970597-4971463
          Length = 748

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 18/63 (28%), Positives = 33/63 (52%)
 Frame = +1

Query: 424 DKIIAIRSIKLYCNIKYTSYLANDMDQNQIIVSSFTKTISQLETPKVTKRFSLV*RTNQR 603
           D++IA  +  LY ++ +     +  + +QI V+  T  + Q     +T+RFS V R+N  
Sbjct: 83  DELIANEN-GLYSSLVHLQQTRDSNEIDQICVTGSTSAVEQSNIHIMTRRFSTVSRSNSA 141

Query: 604 DNL 612
            +L
Sbjct: 142 RSL 144


>11_06_0440 - 23567567-23567952,23568192-23569875,23583064-23584215
          Length = 1073

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = +1

Query: 151 VANLLTINYINEFNNVI*TDKLYINKGLCGLINLLTINVERNNICMVLKEFISHKLDSM 327
           + NL  +  ++   N+I  D   I + LC L+NL  + + RNN+   + + I  KL+ +
Sbjct: 452 IGNLNNLTVLHLAENLISGD---IPETLCNLVNLFVLGLHRNNLSGEIPQSIG-KLEKL 506


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,639,867
Number of Sequences: 37544
Number of extensions: 304919
Number of successful extensions: 511
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)