Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_L20
         (461 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0158 - 26362259-26362695,26363732-26363903                       29   1.4  

>02_05_0158 - 26362259-26362695,26363732-26363903
          Length = 202

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
 Frame = +3

Query: 222 NNIQKHIRDEQVMCVIKSNT-YFYCAITGNKAYCALNYQLDLVRDAQAHRTPTNKQTHSF 398
           N+IQ +      + + K  T YF C  +G   +C+   +L +   A A  TPT   + S 
Sbjct: 82  NSIQSYSDQNTKIALTKPGTRYFICGTSG---HCSGGMKLAVTVSAAAATTPTPTASSSP 138

Query: 399 XSTKNYLYTXFDPNMKPSQMT 461
            ST        DP M     T
Sbjct: 139 PSTATPATPSSDPGMDTPSST 159


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,710,349
Number of Sequences: 37544
Number of extensions: 186183
Number of successful extensions: 351
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 351
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 919380308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)