Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_L20
         (461 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ059565-1|AAY54246.1|  435|Homo sapiens leukemia T cell specifi...    30   4.5  
BC017469-1|AAH17469.1|  423|Homo sapiens adaptor-related protein...    30   4.5  
AF290613-1|AAK28024.1|  423|Homo sapiens clathrin-associated pro...    30   4.5  
AB209808-1|BAD93045.1|  466|Homo sapiens adaptor-related protein...    30   4.5  
X82877-1|CAA58058.1|  617|Homo sapiens sodium-D-glucose cotransp...    29   7.8  
AL121992-8|CAI95731.1|  617|Homo sapiens regulatory solute carri...    29   7.8  

>DQ059565-1|AAY54246.1|  435|Homo sapiens leukemia T cell specific
           adaptor-related protein 1 mu1 subunit protein.
          Length = 435

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = -3

Query: 324 EHNTPYFQ*LRNKNTCLILLHTLLVRRVCVFECYFRGLQRILLIKSFCL 178
           +HN  Y      KN C+ L+ + L + V VF  YF+ L+   +  +F +
Sbjct: 61  KHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVI 109


>BC017469-1|AAH17469.1|  423|Homo sapiens adaptor-related protein
           complex 1, mu 1 subunit protein.
          Length = 423

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = -3

Query: 324 EHNTPYFQ*LRNKNTCLILLHTLLVRRVCVFECYFRGLQRILLIKSFCL 178
           +HN  Y      KN C+ L+ + L + V VF  YF+ L+   +  +F +
Sbjct: 61  KHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVI 109


>AF290613-1|AAK28024.1|  423|Homo sapiens clathrin-associated
           protein AP47 protein.
          Length = 423

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = -3

Query: 324 EHNTPYFQ*LRNKNTCLILLHTLLVRRVCVFECYFRGLQRILLIKSFCL 178
           +HN  Y      KN C+ L+ + L + V VF  YF+ L+   +  +F +
Sbjct: 61  KHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVI 109


>AB209808-1|BAD93045.1|  466|Homo sapiens adaptor-related protein
           complex 1, mu 1 subunit variant protein.
          Length = 466

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = -3

Query: 324 EHNTPYFQ*LRNKNTCLILLHTLLVRRVCVFECYFRGLQRILLIKSFCL 178
           +HN  Y      KN C+ L+ + L + V VF  YF+ L+   +  +F +
Sbjct: 92  KHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVI 140


>X82877-1|CAA58058.1|  617|Homo sapiens sodium-D-glucose
           cotransporter protein.
          Length = 617

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 22/75 (29%), Positives = 31/75 (41%)
 Frame = +3

Query: 162 TSQGYLNKKI*SKESSEGL*NNIQKHIRDEQVMCVIKSNTYFYCAITGNKAYCALNYQLD 341
           T  G L K   ++ S++GL      H R E  + V  +  +      G K +   N  L 
Sbjct: 105 TVAGNLEKS--AERSTQGL--KFHLHTRQEASLSVTSTRMHEPQMFLGEKDWHPENQNLS 160

Query: 342 LVRDAQAHRTPTNKQ 386
            V D Q H  P N+Q
Sbjct: 161 QVSDPQQHEEPGNEQ 175


>AL121992-8|CAI95731.1|  617|Homo sapiens regulatory solute carrier
           protein, family 1, member 1 protein.
          Length = 617

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 22/75 (29%), Positives = 31/75 (41%)
 Frame = +3

Query: 162 TSQGYLNKKI*SKESSEGL*NNIQKHIRDEQVMCVIKSNTYFYCAITGNKAYCALNYQLD 341
           T  G L K   ++ S++GL      H R E  + V  +  +      G K +   N  L 
Sbjct: 105 TVAGNLEKS--AERSTQGL--KFHLHTRQEASLSVTSTRMHEPQMFLGEKDWHPENQNLS 160

Query: 342 LVRDAQAHRTPTNKQ 386
            V D Q H  P N+Q
Sbjct: 161 QVSDPQQHEEPGNEQ 175


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,355,240
Number of Sequences: 237096
Number of extensions: 1150049
Number of successful extensions: 2283
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2281
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)