Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_L18
(747 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038611-8|AAB92035.1| 111|Caenorhabditis elegans Hypothetical ... 107 8e-24
Z74046-2|CAA98555.1| 123|Caenorhabditis elegans Hypothetical pr... 104 8e-23
CU457743-1|CAM36364.1| 692|Caenorhabditis elegans Hypothetical ... 29 3.5
Z71267-5|CAJ80828.1| 266|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z54281-5|CAA91047.1| 191|Caenorhabditis elegans Hypothetical pr... 28 6.1
U23521-5|AAC46813.2| 250|Caenorhabditis elegans Hypothetical pr... 28 6.1
U52070-1|AAD11527.1| 67|Caenorhabditis elegans dauer-upregulat... 28 8.1
AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical ... 28 8.1
>AF038611-8|AAB92035.1| 111|Caenorhabditis elegans Hypothetical
protein E04A4.7 protein.
Length = 111
Score = 107 bits (257), Expect = 8e-24
Identities = 46/79 (58%), Positives = 56/79 (70%)
Frame = -2
Query: 704 VPAGNAENGKKIFVQRCAQCHTVEAGGKHKVGPNLHGFFGRKTGQAAGFSYSDANKAKGI 525
+PAG+ E GKK++ QRC QCH V++ K GP LHG GR +G +GF YS ANK KG+
Sbjct: 4 IPAGDYEKGKKVYKQRCLQCHVVDSTAT-KTGPTLHGVIGRTSGTVSGFDYSAANKNKGV 62
Query: 524 TWNDDTLFEYLENPKKYIP 468
W +TLFEYL NPKKYIP
Sbjct: 63 VWTRETLFEYLLNPKKYIP 81
Score = 48.0 bits (109), Expect = 7e-06
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = -3
Query: 484 PRNTSPGTKMVFAGLKKANERADLIAYLK 398
P+ PGTKMVFAGLKKA+ERADLI Y++
Sbjct: 76 PKKYIPGTKMVFAGLKKADERADLIKYIE 104
>Z74046-2|CAA98555.1| 123|Caenorhabditis elegans Hypothetical
protein ZC116.2 protein.
Length = 123
Score = 104 bits (249), Expect = 8e-23
Identities = 46/79 (58%), Positives = 57/79 (72%)
Frame = -2
Query: 704 VPAGNAENGKKIFVQRCAQCHTVEAGGKHKVGPNLHGFFGRKTGQAAGFSYSDANKAKGI 525
+P G+ E GKKIF QRC QCH V + + K GP L+G GR++GQ AGF YS ANK KG+
Sbjct: 14 IPEGDNEKGKKIFKQRCEQCHVVNSL-QTKTGPTLNGVIGRQSGQVAGFDYSAANKNKGV 72
Query: 524 TWNDDTLFEYLENPKKYIP 468
W+ TLF+YL +PKKYIP
Sbjct: 73 VWDRQTLFDYLADPKKYIP 91
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = -3
Query: 484 PRNTSPGTKMVFAGLKKANERADLIAYLK 398
P+ PGTKMVFAGLKKA+ERADLI +++
Sbjct: 86 PKKYIPGTKMVFAGLKKADERADLIKFIE 114
>CU457743-1|CAM36364.1| 692|Caenorhabditis elegans Hypothetical
protein K09E10.1 protein.
Length = 692
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = -1
Query: 459 RWCLLDSRRQMSVLTL-LPISNLLPSNFKVIENSIRSI-FHNISG 331
+WCL S ++L L ISN L SNF V +++I+ I F N G
Sbjct: 369 KWCLNLSNINCALLIFFLFISNFLSSNFLVNKDAIQEIKFRNTPG 413
>Z71267-5|CAJ80828.1| 266|Caenorhabditis elegans Hypothetical
protein W01A8.7 protein.
Length = 266
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 442 VQQTPSWFQGMYFLGFSRYSKRVSSF-HVMPLALLASEYENPAAW 573
+ +T WFQG+ L +SR K+ + H+ + E EN W
Sbjct: 206 LDRTFLWFQGLNGLDYSRAKKKAGHYQHLKKILYKKWESENNGKW 250
>Z54281-5|CAA91047.1| 191|Caenorhabditis elegans Hypothetical
protein F46C5.8 protein.
Length = 191
Score = 28.3 bits (60), Expect = 6.1
Identities = 26/93 (27%), Positives = 35/93 (37%), Gaps = 7/93 (7%)
Frame = +1
Query: 466 QGMYFLGFSR--YSKRVSSFHVMPLALLASEYENPAAWPVFRPKNPCRFGPTLCLPPAST 639
QG Y + ++ Y + + P A E+E+ PV K F P + P
Sbjct: 56 QGFYIVAYAVGIYYLNLFLLFLTPSIDPALEFEDEDDGPVLPSKTNDEFRPFMRRLPEFK 115
Query: 640 VWHWAHRCTKI-----FFPFSAFPAGTPILNFY 723
WH + T I FF F P PIL Y
Sbjct: 116 FWHSFMKATLIAITCTFFEFFDVPVFWPILVMY 148
>U23521-5|AAC46813.2| 250|Caenorhabditis elegans Hypothetical
protein F41C3.6 protein.
Length = 250
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 423 VLTLLPISNLLPSNFKVIENSIRSIFHNISGIYFL 319
+L LP N + ++N ++SI HNI YFL
Sbjct: 10 LLLFLPQENRYFVELRSLKNLLKSILHNIENDYFL 44
>U52070-1|AAD11527.1| 67|Caenorhabditis elegans dauer-upregulated
gene protein.
Length = 67
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -3
Query: 685 KMERKFLYNDVPSATLLKLVANTK*DRIYMDS 590
+ E+ + NDVPS LL++V DRI ++S
Sbjct: 19 RKEQMMVQNDVPSPPLLEVVRPRSRDRIMLES 50
>AF101312-1|AAC69221.3| 813|Caenorhabditis elegans Hypothetical
protein F56E10.2 protein.
Length = 813
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Frame = -2
Query: 590 FGRKTGQAAGFSYSDANK---AKGITWNDDTLFEYLEN--PKKY 474
FG++ G A GF + NK K ND L +L N KKY
Sbjct: 569 FGKRNGNAYGFEMASINKLADVKNALRNDRNLLHFLVNFIEKKY 612
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,242,197
Number of Sequences: 27780
Number of extensions: 378495
Number of successful extensions: 1086
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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