Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_L17
(827 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457238-1|CAG33519.1| 153|Homo sapiens NOLA2 protein. 56 2e-07
BC006387-1|AAH06387.1| 153|Homo sapiens nucleolar protein famil... 56 2e-07
BC000009-1|AAH00009.1| 153|Homo sapiens nucleolar protein famil... 56 2e-07
AK000486-1|BAA91198.1| 153|Homo sapiens protein ( Homo sapiens ... 56 2e-07
AJ293309-1|CAC08452.1| 153|Homo sapiens NHP2 protein protein. 56 2e-07
AF401219-1|AAL02175.1| 153|Homo sapiens small nucleolar RNA bin... 56 2e-07
D87444-1|BAA13385.2| 692|Homo sapiens KIAA0255 protein. 31 6.7
BC022850-1|AAH22850.1| 625|Homo sapiens transmembrane 9 superfa... 31 6.7
BC021107-1|AAH21107.1| 625|Homo sapiens transmembrane 9 superfa... 31 6.7
AL049539-3|CAB75607.2| 625|Homo sapiens transmembrane 9 superfa... 31 6.7
AK126534-1|BAC86581.1| 528|Homo sapiens protein ( Homo sapiens ... 31 6.7
>CR457238-1|CAG33519.1| 153|Homo sapiens NOLA2 protein.
Length = 153
Score = 55.6 bits (128), Expect = 2e-07
Identities = 22/55 (40%), Positives = 38/55 (69%)
Frame = -2
Query: 814 EEKDVQYCYTPSRKDIGAAMGTMRGCIMVLVKEHEDYKDLYEEVKSEIKLLGHPL 650
E++++ Y Y PS+ D+GAA G+ R +++VK HE+Y++ Y+E E++ L PL
Sbjct: 99 EDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHEEYQEAYDECLEEVQSLPLPL 153
>BC006387-1|AAH06387.1| 153|Homo sapiens nucleolar protein family
A, member 2 (H/ACA small nucleolar RNPs) protein.
Length = 153
Score = 55.6 bits (128), Expect = 2e-07
Identities = 22/55 (40%), Positives = 38/55 (69%)
Frame = -2
Query: 814 EEKDVQYCYTPSRKDIGAAMGTMRGCIMVLVKEHEDYKDLYEEVKSEIKLLGHPL 650
E++++ Y Y PS+ D+GAA G+ R +++VK HE+Y++ Y+E E++ L PL
Sbjct: 99 EDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHEEYQEAYDECLEEVQSLPLPL 153
>BC000009-1|AAH00009.1| 153|Homo sapiens nucleolar protein family
A, member 2 (H/ACA small nucleolar RNPs) protein.
Length = 153
Score = 55.6 bits (128), Expect = 2e-07
Identities = 22/55 (40%), Positives = 38/55 (69%)
Frame = -2
Query: 814 EEKDVQYCYTPSRKDIGAAMGTMRGCIMVLVKEHEDYKDLYEEVKSEIKLLGHPL 650
E++++ Y Y PS+ D+GAA G+ R +++VK HE+Y++ Y+E E++ L PL
Sbjct: 99 EDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHEEYQEAYDECLEEVQSLPLPL 153
>AK000486-1|BAA91198.1| 153|Homo sapiens protein ( Homo sapiens
cDNA FLJ20479 fis, clone KAT07382. ).
Length = 153
Score = 55.6 bits (128), Expect = 2e-07
Identities = 22/55 (40%), Positives = 38/55 (69%)
Frame = -2
Query: 814 EEKDVQYCYTPSRKDIGAAMGTMRGCIMVLVKEHEDYKDLYEEVKSEIKLLGHPL 650
E++++ Y Y PS+ D+GAA G+ R +++VK HE+Y++ Y+E E++ L PL
Sbjct: 99 EDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHEEYQEAYDECLEEVQSLPLPL 153
>AJ293309-1|CAC08452.1| 153|Homo sapiens NHP2 protein protein.
Length = 153
Score = 55.6 bits (128), Expect = 2e-07
Identities = 22/55 (40%), Positives = 38/55 (69%)
Frame = -2
Query: 814 EEKDVQYCYTPSRKDIGAAMGTMRGCIMVLVKEHEDYKDLYEEVKSEIKLLGHPL 650
E++++ Y Y PS+ D+GAA G+ R +++VK HE+Y++ Y+E E++ L PL
Sbjct: 99 EDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHEEYQEAYDECLEEVQSLPLPL 153
>AF401219-1|AAL02175.1| 153|Homo sapiens small nucleolar RNA
binding-like protein NHP2 protein.
Length = 153
Score = 55.6 bits (128), Expect = 2e-07
Identities = 22/55 (40%), Positives = 38/55 (69%)
Frame = -2
Query: 814 EEKDVQYCYTPSRKDIGAAMGTMRGCIMVLVKEHEDYKDLYEEVKSEIKLLGHPL 650
E++++ Y Y PS+ D+GAA G+ R +++VK HE+Y++ Y+E E++ L PL
Sbjct: 99 EDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHEEYQEAYDECLEEVQSLPLPL 153
>D87444-1|BAA13385.2| 692|Homo sapiens KIAA0255 protein.
Length = 692
Score = 30.7 bits (66), Expect = 6.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 626 IRILFIYLQWMTEQFYFTFNFLVQIFIILM 715
I + FI+ QFY+ F FL +FIIL+
Sbjct: 566 IELFFIFSAIWENQFYYLFGFLFLVFIILV 595
>BC022850-1|AAH22850.1| 625|Homo sapiens transmembrane 9
superfamily protein member 4 protein.
Length = 625
Score = 30.7 bits (66), Expect = 6.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 626 IRILFIYLQWMTEQFYFTFNFLVQIFIILM 715
I + FI+ QFY+ F FL +FIIL+
Sbjct: 499 IELFFIFSAIWENQFYYLFGFLFLVFIILV 528
>BC021107-1|AAH21107.1| 625|Homo sapiens transmembrane 9
superfamily protein member 4 protein.
Length = 625
Score = 30.7 bits (66), Expect = 6.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 626 IRILFIYLQWMTEQFYFTFNFLVQIFIILM 715
I + FI+ QFY+ F FL +FIIL+
Sbjct: 499 IELFFIFSAIWENQFYYLFGFLFLVFIILV 528
>AL049539-3|CAB75607.2| 625|Homo sapiens transmembrane 9
superfamily protein member 4 protein.
Length = 625
Score = 30.7 bits (66), Expect = 6.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 626 IRILFIYLQWMTEQFYFTFNFLVQIFIILM 715
I + FI+ QFY+ F FL +FIIL+
Sbjct: 499 IELFFIFSAIWENQFYYLFGFLFLVFIILV 528
>AK126534-1|BAC86581.1| 528|Homo sapiens protein ( Homo sapiens
cDNA FLJ44570 fis, clone UTERU3011063, highly similar
to Transmembrane 9 superfamily protein member 4. ).
Length = 528
Score = 30.7 bits (66), Expect = 6.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 626 IRILFIYLQWMTEQFYFTFNFLVQIFIILM 715
I + FI+ QFY+ F FL +FIIL+
Sbjct: 402 IELFFIFSAIWENQFYYLFGFLFLVFIILV 431
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,374,972
Number of Sequences: 237096
Number of extensions: 2326270
Number of successful extensions: 3730
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3730
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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