Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_L17
         (827 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023844-2|CAA19527.1|  163|Caenorhabditis elegans Hypothetical ...    53   2e-07
Z46933-4|CAA87037.1|  452|Caenorhabditis elegans Hypothetical pr...    29   5.4  
Z73971-10|CAA98251.1|  838|Caenorhabditis elegans Hypothetical p...    28   9.4  
U33934-1|AAA96507.1|  838|Caenorhabditis elegans MEC-9L protein.       28   9.4  
U33933-1|AAA96506.1|  838|Caenorhabditis elegans MEC-9L protein.       28   9.4  

>AL023844-2|CAA19527.1|  163|Caenorhabditis elegans Hypothetical
           protein Y48A6B.3 protein.
          Length = 163

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 22/53 (41%), Positives = 35/53 (66%)
 Frame = -2

Query: 820 VXEEKDVQYCYTPSRKDIGAAMGTMRGCIMVLVKEHEDYKDLYEEVKSEIKLL 662
           + EEK++ Y Y PSR+ +G A+G  R  I++ VK   D+K+LY+EV   ++ L
Sbjct: 106 ICEEKEIPYVYIPSREQLGLAVGHRRPSILIFVKPSGDFKELYDEVAEALRHL 158


>Z46933-4|CAA87037.1|  452|Caenorhabditis elegans Hypothetical
           protein F34H10.4 protein.
          Length = 452

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = -2

Query: 619 LKLNSKTXKLINS-YILVIKSALNFLYITI*LFHS 518
           LK+ S    L++  YIL+I S+LNF Y+T  +F++
Sbjct: 336 LKVRSVVQYLVSKHYILMILSSLNFQYVTPIVFYN 370


>Z73971-10|CAA98251.1|  838|Caenorhabditis elegans Hypothetical
           protein C50H2.3 protein.
          Length = 838

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 376 ENLFFFSSXCIKQCKHNMSDPV 441
           +N F     C+KQCK+ M +PV
Sbjct: 73  KNRFSSKQQCVKQCKYKMFNPV 94


>U33934-1|AAA96507.1|  838|Caenorhabditis elegans MEC-9L protein.
          Length = 838

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 376 ENLFFFSSXCIKQCKHNMSDPV 441
           +N F     C+KQCK+ M +PV
Sbjct: 73  KNRFSSKQQCVKQCKYKMFNPV 94


>U33933-1|AAA96506.1|  838|Caenorhabditis elegans MEC-9L protein.
          Length = 838

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 376 ENLFFFSSXCIKQCKHNMSDPV 441
           +N F     C+KQCK+ M +PV
Sbjct: 73  KNRFSSKQQCVKQCKYKMFNPV 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,351,319
Number of Sequences: 27780
Number of extensions: 391304
Number of successful extensions: 801
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)