Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_L12
         (697 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4LA89 Cluster: Similarity; n=1; Staphylococcus haemoly...    35   2.2  
UniRef50_Q8D3F5 Cluster: FlgK protein; n=1; Wigglesworthia gloss...    33   6.7  
UniRef50_Q3B0V9 Cluster: Putative uncharacterized protein; n=2; ...    33   8.8  

>UniRef50_Q4LA89 Cluster: Similarity; n=1; Staphylococcus
           haemolyticus JCSC1435|Rep: Similarity - Staphylococcus
           haemolyticus (strain JCSC1435)
          Length = 65

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 24/60 (40%), Positives = 29/60 (48%)
 Frame = -2

Query: 369 CTTTQLLVKKYFKLKNEKCTNAKL*LRCLYLVHSNIHLGISLTFNEYIHSICKYFVENCH 190
           C+    L+   FKL N  C N    L  L  VH NIH    LTFN+Y +    Y + NCH
Sbjct: 10  CSLYSSLLSSCFKLINF-CFNL---LYTLINVHYNIHFYSFLTFNKYYN----YIISNCH 61


>UniRef50_Q8D3F5 Cluster: FlgK protein; n=1; Wigglesworthia
           glossinidia endosymbiont of Glossina brevipalpis|Rep:
           FlgK protein - Wigglesworthia glossinidia brevipalpis
          Length = 545

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
 Frame = -2

Query: 462 NFKKCNSFF--IS*KIDAIFINFKS*I--NLKNVNCTTTQL--LVKKYFKLKNEKCTNAK 301
           NFK  N+ F  I  +I  +  N  + I  N+ ++N  T+QL  + K+  K KNEK +   
Sbjct: 136 NFKSLNNHFNFIGKEIKDLENNIYNEIKLNISDINSLTSQLSSINKEILKSKNEKISLDL 195

Query: 300 L*LRCLYLVHSNIHLGISLTFNE 232
           L  R   L   +  +GIS+ FNE
Sbjct: 196 LDKRDQLLSEISKKIGISVNFNE 218


>UniRef50_Q3B0V9 Cluster: Putative uncharacterized protein; n=2;
           Synechococcus|Rep: Putative uncharacterized protein -
           Synechococcus sp. (strain CC9902)
          Length = 227

 Score = 32.7 bits (71), Expect = 8.8
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 86  IFLLNESECRAQGFNKQIRKNSYSSL 163
           IFL+  ++C  + FNK + KN YSS+
Sbjct: 32  IFLIGHNKCGTRSFNKLLNKNGYSSI 57


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,996,741
Number of Sequences: 1657284
Number of extensions: 11363519
Number of successful extensions: 21991
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21987
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)