Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_L12
         (697 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0442 - 15967204-15967501,15967954-15968126,15968581-159687...    30   1.5  
03_04_0202 - 18430330-18430484,18430617-18430756,18431316-18431389     29   2.7  
04_03_0441 + 15956927-15957191,15957359-15957737,15958197-159584...    29   3.5  

>04_03_0442 -
           15967204-15967501,15967954-15968126,15968581-15968716,
           15969064-15969288,15969792-15970053,15970062-15970169,
           15970337-15970595,15971188-15971199
          Length = 490

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -2

Query: 333 KLKNEKCT---NAKL*LRCLYLVHSNIHLGISLTFNEYIHSICK 211
           KLK E CT    +K  LR +YLV   +HLGI   F + I +  K
Sbjct: 16  KLKEEVCTLFTPSKDMLRRMYLVDEIVHLGIDHLFEKEIETALK 59


>03_04_0202 - 18430330-18430484,18430617-18430756,18431316-18431389
          Length = 122

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +2

Query: 548 SNASWTRIEISRVSNSNRQRYRHIHVLNGN 637
           + A  TR  I  V+NSN QR  HIH L+ +
Sbjct: 5   TRAPSTRAIIDEVNNSNSQRRHHIHQLHAS 34


>04_03_0441 +
           15956927-15957191,15957359-15957737,15958197-15958421,
           15958549-15958684,15960559-15960810,15961585-15961881
          Length = 517

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = -2

Query: 363 TTQLLVKKYFKLKNEKCT---NAKL*LRCLYLVHSNIHLGISLTFNEYIHSICK 211
           +T+ +  +  KLK + CT     K  LR +YLV   +HLGI   F + I +  K
Sbjct: 4   STEWMRDRADKLKEDVCTLFTPTKDILRRMYLVDEIVHLGIDHLFEKEIETALK 57


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,337,985
Number of Sequences: 37544
Number of extensions: 271221
Number of successful extensions: 418
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 418
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)