Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_L08
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   1.8  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   1.8  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    23   3.2  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    23   3.2  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    23   3.2  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    23   3.2  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    23   3.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.7  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/24 (41%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
 Frame = -3

Query: 254 FC-GEISCEDNIKNDSARTEDDPN 186
           FC G+  C+D    +S   E DPN
Sbjct: 127 FCNGKPDCKDESDENSCTVETDPN 150


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/24 (41%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
 Frame = -3

Query: 254 FC-GEISCEDNIKNDSARTEDDPN 186
           FC G+  C+D    +S   E DPN
Sbjct: 134 FCNGKPDCKDESDENSCTVETDPN 157


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 586 PPE*GPKATTGITIRLA 536
           PP+ G K T G+TI L+
Sbjct: 236 PPDSGEKLTLGVTILLS 252


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 586 PPE*GPKATTGITIRLA 536
           PP+ G K T G+TI L+
Sbjct: 236 PPDSGEKLTLGVTILLS 252


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 586 PPE*GPKATTGITIRLA 536
           PP+ G K T G+TI L+
Sbjct: 236 PPDSGEKLTLGVTILLS 252


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 586 PPE*GPKATTGITIRLA 536
           PP+ G K T G+TI L+
Sbjct: 236 PPDSGEKLTLGVTILLS 252


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 586 PPE*GPKATTGITIRLA 536
           PP+ G K T G+TI L+
Sbjct: 236 PPDSGEKLTLGVTILLS 252


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/24 (37%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
 Frame = -3

Query: 254 FC-GEISCEDNIKNDSARTEDDPN 186
           FC GE  C D    ++   ++DPN
Sbjct: 135 FCNGEKDCSDGSDENTCDIDNDPN 158


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 548  YSPGWKFNHWELKGVPVR 495
            Y+  +  N+W  +GVP R
Sbjct: 1617 YNANFSINYWISEGVPRR 1634


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,269
Number of Sequences: 336
Number of extensions: 3545
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)