Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_L07
         (769 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015A52A9 Cluster: UPI00015A52A9 related cluster; n...    36   1.5  
UniRef50_Q7Z628 Cluster: Neuroepithelial cell-transforming gene ...    33   5.9  
UniRef50_A0CKH6 Cluster: Chromosome undetermined scaffold_2, who...    33   7.8  

>UniRef50_UPI00015A52A9 Cluster: UPI00015A52A9 related cluster; n=2;
            Danio rerio|Rep: UPI00015A52A9 UniRef100 entry - Danio
            rerio
          Length = 2279

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = -3

Query: 467  CLEKSRTLNC--LIIEIIFICFSAYYLLSVLFIYCLHDKCM*KLQVMLLRKFFEWCI*NI 294
            C E++   NC   II  IF C+   YL+ +L+++ ++  C+  + +M +   F +C+ N+
Sbjct: 878  CCEETDNFNCYLFIIYYIFSCYIYNYLICLLYLF-IYLLCLLSIFIMFIIFMFIYCV-NL 935

Query: 293  VNFLTNC 273
              +L  C
Sbjct: 936  FIYLLCC 942


>UniRef50_Q7Z628 Cluster: Neuroepithelial cell-transforming gene 1
           protein; n=18; Euteleostomi|Rep: Neuroepithelial
           cell-transforming gene 1 protein - Homo sapiens (Human)
          Length = 596

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -2

Query: 246 KQINHIIVNIFPSSNKYAKYCSNFAISNELVRFKKYCP 133
           +QI HI+V+  P  N Y  YCSN   +  L+  KK  P
Sbjct: 247 EQIGHILVSWLPRLNAYRGYCSNQLAAKALLDQKKQDP 284


>UniRef50_A0CKH6 Cluster: Chromosome undetermined scaffold_2, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_2, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1678

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 16/50 (32%), Positives = 30/50 (60%)
 Frame = +2

Query: 59   PYRRNIVVTHYII*KYAFKLSKP*YGQYFLNLTNSFEIAKFEQYFAYLFE 208
            PY+ +IVVT Y I +  +++    Y  +++++  S  + K +QYF+Y  E
Sbjct: 963  PYQ-DIVVTAYSIPRQFYQIKYNEYTNHYMDIVLSESVEKIQQYFSYPIE 1011


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,859,745
Number of Sequences: 1657284
Number of extensions: 12613499
Number of successful extensions: 24158
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24149
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64204279620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)