Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_L07
         (769 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02081-1|AAB08847.1|  460|Homo sapiens guanine nucleotide regula...    33   0.85 
BC053553-1|AAH53553.1|  596|Homo sapiens neuroepithelial cell tr...    33   0.85 
BC010285-1|AAH10285.1|  542|Homo sapiens neuroepithelial cell tr...    33   0.85 
AL732437-5|CAI11033.1|  596|Homo sapiens neuroepithelial cell tr...    33   0.85 
AL732437-4|CAI11032.1|  160|Homo sapiens neuroepithelial cell tr...    33   0.85 
AL732437-3|CAI11031.1|  542|Homo sapiens neuroepithelial cell tr...    33   0.85 
AJ010046-1|CAA08974.1|  548|Homo sapiens guanine nucleotide-exch...    33   0.85 
AB209852-1|BAD93089.1|  624|Homo sapiens Neuroepithelial cell tr...    33   0.85 

>U02081-1|AAB08847.1|  460|Homo sapiens guanine nucleotide
           regulatory protein protein.
          Length = 460

 Score = 33.5 bits (73), Expect = 0.85
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -2

Query: 246 KQINHIIVNIFPSSNKYAKYCSNFAISNELVRFKKYCP 133
           +QI HI+V+  P  N Y  YCSN   +  L+  KK  P
Sbjct: 105 EQIGHILVSWLPRLNAYRGYCSNQLAAKALLDQKKQDP 142


>BC053553-1|AAH53553.1|  596|Homo sapiens neuroepithelial cell
           transforming gene 1 protein.
          Length = 596

 Score = 33.5 bits (73), Expect = 0.85
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -2

Query: 246 KQINHIIVNIFPSSNKYAKYCSNFAISNELVRFKKYCP 133
           +QI HI+V+  P  N Y  YCSN   +  L+  KK  P
Sbjct: 247 EQIGHILVSWLPRLNAYRGYCSNQLAAKALLDQKKQDP 284


>BC010285-1|AAH10285.1|  542|Homo sapiens neuroepithelial cell
           transforming gene 1 protein.
          Length = 542

 Score = 33.5 bits (73), Expect = 0.85
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -2

Query: 246 KQINHIIVNIFPSSNKYAKYCSNFAISNELVRFKKYCP 133
           +QI HI+V+  P  N Y  YCSN   +  L+  KK  P
Sbjct: 193 EQIGHILVSWLPRLNAYRGYCSNQLAAKALLDQKKQDP 230


>AL732437-5|CAI11033.1|  596|Homo sapiens neuroepithelial cell
           transforming gene 1 protein.
          Length = 596

 Score = 33.5 bits (73), Expect = 0.85
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -2

Query: 246 KQINHIIVNIFPSSNKYAKYCSNFAISNELVRFKKYCP 133
           +QI HI+V+  P  N Y  YCSN   +  L+  KK  P
Sbjct: 247 EQIGHILVSWLPRLNAYRGYCSNQLAAKALLDQKKQDP 284


>AL732437-4|CAI11032.1|  160|Homo sapiens neuroepithelial cell
           transforming gene 1 protein.
          Length = 160

 Score = 33.5 bits (73), Expect = 0.85
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -2

Query: 246 KQINHIIVNIFPSSNKYAKYCSNFAISNELVRFKKYCP 133
           +QI HI+V+  P  N Y  YCSN   +  L+  KK  P
Sbjct: 65  EQIGHILVSWLPRLNAYRGYCSNQLAAKALLDQKKQDP 102


>AL732437-3|CAI11031.1|  542|Homo sapiens neuroepithelial cell
           transforming gene 1 protein.
          Length = 542

 Score = 33.5 bits (73), Expect = 0.85
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -2

Query: 246 KQINHIIVNIFPSSNKYAKYCSNFAISNELVRFKKYCP 133
           +QI HI+V+  P  N Y  YCSN   +  L+  KK  P
Sbjct: 193 EQIGHILVSWLPRLNAYRGYCSNQLAAKALLDQKKQDP 230


>AJ010046-1|CAA08974.1|  548|Homo sapiens guanine
           nucleotide-exchange factor protein.
          Length = 548

 Score = 33.5 bits (73), Expect = 0.85
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -2

Query: 246 KQINHIIVNIFPSSNKYAKYCSNFAISNELVRFKKYCP 133
           +QI HI+V+  P  N Y  YCSN   +  L+  KK  P
Sbjct: 193 EQIGHILVSWLPRLNAYRGYCSNQLAAKALLDQKKQDP 230


>AB209852-1|BAD93089.1|  624|Homo sapiens Neuroepithelial cell
           transforming gene 1 protein variant protein.
          Length = 624

 Score = 33.5 bits (73), Expect = 0.85
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -2

Query: 246 KQINHIIVNIFPSSNKYAKYCSNFAISNELVRFKKYCP 133
           +QI HI+V+  P  N Y  YCSN   +  L+  KK  P
Sbjct: 276 EQIGHILVSWLPRLNAYRGYCSNQLAAKALLDQKKQDP 313


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,756,980
Number of Sequences: 237096
Number of extensions: 1764428
Number of successful extensions: 2494
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2494
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)