Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_L07
         (769 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       27   0.15 
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   2.4  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   3.1  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   3.1  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   3.1  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   4.1  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   7.2  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   7.2  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   9.5  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 27.5 bits (58), Expect = 0.15
 Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
 Frame = -3

Query: 458 KSRTLNC--LIIEIIFICFSAYYLLSVLF 378
           K RTL    +II + FIC++ YY++S+ +
Sbjct: 255 KIRTLKMTVIIIAVFFICWTPYYVMSLWY 283


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 632 STPKYNCHLYNLIPN 676
           +TP+YN HLY   P+
Sbjct: 82  TTPEYNNHLYGSTPD 96


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/28 (28%), Positives = 20/28 (71%)
 Frame = -3

Query: 455 SRTLNCLIIEIIFICFSAYYLLSVLFIY 372
           +R L+ ++I   FIC++ +++  +L++Y
Sbjct: 259 TRMLSAVVITF-FICWAPFHVQRLLYVY 285


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/36 (27%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -3

Query: 467 CLEKSRT--LNCLIIEIIFICFSAYYLLSVLFIYCL 366
           C  K+ T   +CL ++++F    +YYL+ +    C+
Sbjct: 219 CNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCM 254


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/36 (27%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -3

Query: 467 CLEKSRT--LNCLIIEIIFICFSAYYLLSVLFIYCL 366
           C  K+ T   +CL ++++F    +YYL+ +    C+
Sbjct: 219 CNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCM 254


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 488 KCVSIIKCLEKSRTLNCLIIEIIFICFSAYYLLSV 384
           KC    +  E+    +CL +++IF    A+Y  +V
Sbjct: 273 KCSLCQRRFEEQGNYSCLKVDLIFTRDRAFYFTTV 307


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -3

Query: 515 VALKKWYSLKCVSIIKCLEKSRTLNCLI 432
           V L  W+  K +   + L  +RT+N ++
Sbjct: 66  VLLSVWWDYKGIVYFELLSPNRTINSVV 93


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 5/21 (23%), Positives = 15/21 (71%)
 Frame = -3

Query: 434 IIEIIFICFSAYYLLSVLFIY 372
           ++ + FIC++ ++   +L++Y
Sbjct: 275 VVILFFICWAPFHTQRLLYVY 295


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -3

Query: 515 VALKKWYSLKCVSIIKCLEKSRTLNCLI 432
           V L  W+  K +   + L  +RT+N ++
Sbjct: 188 VLLSVWWDYKGIVYFELLPPNRTINSVV 215


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,255
Number of Sequences: 438
Number of extensions: 4521
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)