Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_L05
(828 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 30 0.46
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 30 0.46
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 29 0.80
SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr 2... 27 3.2
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 27 3.2
SPAC17G6.02c |||RTA1-like protein|Schizosaccharomyces pombe|chr ... 27 4.3
SPCC74.09 |mug24||RNA-binding protein, rrm type|Schizosaccharomy... 26 5.7
SPAC23H3.04 |||conserved fungal protein|Schizosaccharomyces pomb... 26 7.5
SPAC23C11.14 |zhf1|zhf, zhf|zinc ion transporter Zhf1|Schizosacc... 26 7.5
SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchang... 26 7.5
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 29.9 bits (64), Expect = 0.46
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 667 PTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAYKIYTV 551
PT KL A C H Y GV A+ +L+R YK+ V
Sbjct: 680 PTVEKLVA-CTTHFYEGVRKSALSSLWRCATTYYKVCNV 717
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 29.9 bits (64), Expect = 0.46
Identities = 20/78 (25%), Positives = 34/78 (43%)
Frame = -3
Query: 709 GLSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAYKIYTVFWGFTIF 530
G ++ ++ E+FP V+ A I+ LF + V W F
Sbjct: 464 GPNSTTFIYPAEVFPARVRGTAHGISAALGKCGAILASLLFNFLTSIIGYGNVMWIFCGC 523
Query: 529 SFLGLVFMVMMLPETKGK 476
+ G++F ++LPETKG+
Sbjct: 524 MWGGILF-TLLLPETKGR 540
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 29.1 bits (62), Expect = 0.80
Identities = 19/78 (24%), Positives = 34/78 (43%)
Frame = -3
Query: 709 GLSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAYKIYTVFWGFTIF 530
G ++ ++ E+FP V+ A ++ LF + V W F
Sbjct: 463 GPNSTTFIYPAEVFPARVRGTAHGVSAALGKCGAILASLLFNFLTGVIGYGNVMWIFCGC 522
Query: 529 SFLGLVFMVMMLPETKGK 476
+ G++F ++LPETKG+
Sbjct: 523 MWGGILF-TLLLPETKGR 539
>SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 479
Score = 27.1 bits (57), Expect = 3.2
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = -1
Query: 489 KQKESPSPQSKRNCATKS----PETTQRKLTRSNTNQKIRDDYLFSLVFSVKLIRDQ 331
K K+SP + KR + S PET RKL S + +KI + L + +L Q
Sbjct: 365 KLKDSPFKKPKRRYSKSSTLVLPETNIRKLANSYSQKKIAGSVIEELTTASELFFKQ 421
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 27.1 bits (57), Expect = 3.2
Identities = 23/93 (24%), Positives = 36/93 (38%)
Frame = -3
Query: 709 GLSTVPYVTIGEMFPTNVKLYASCIAHIYTGVAMFAVQNLFRVVEQAYKIYTVFWGFTIF 530
G + ++ E+FP V+ A ++ LF + V W F
Sbjct: 452 GPNATTFLYPAEVFPARVRGTAHGLSAALGKCGAILASLLFNFLTSVIGYGNVMWIFCGC 511
Query: 529 SFLGLVFMVMMLPETKGKSFASIQAQLRHEVAR 431
+ G +F ++LPETK + I R EV R
Sbjct: 512 MW-GAIFFTLLLPETKMRDADEID---REEVLR 540
>SPAC17G6.02c |||RTA1-like protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 324
Score = 26.6 bits (56), Expect = 4.3
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 140 RLPEDYNPDDFSAFNG 187
RL YNPDD++AF G
Sbjct: 59 RLDASYNPDDYNAFLG 74
>SPCC74.09 |mug24||RNA-binding protein, rrm type|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 654
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -2
Query: 464 NPSATAPRSRQRQRKEN*HGRILTRKYETTTYSH 363
NP T+ R RQ++ K+N + + T T H
Sbjct: 390 NPDTTSDRCRQQESKDNGNRTVFLGNLHTKTKGH 423
>SPAC23H3.04 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 300
Score = 25.8 bits (54), Expect = 7.5
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -3
Query: 568 YKIYTVFWGFTIFSFLGLVFM-VMMLPE 488
YKIY I+ FLG+ VM+LPE
Sbjct: 167 YKIYVTLLKIDIYFFLGVTVQYVMVLPE 194
>SPAC23C11.14 |zhf1|zhf, zhf|zinc ion transporter
Zhf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 25.8 bits (54), Expect = 7.5
Identities = 11/54 (20%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 601 VQNLFRVVEQAYKIYTV-FWGFTIFSFLGLVFMVMMLPETKGKSFASIQAQLRH 443
V NL ++ ++ + W + + V + + LP+ KG+S+ + +R+
Sbjct: 305 VSNLINHLDGVESVHELHIWQLSDVKLIATVHVCVTLPDDKGESYTKLTTDIRN 358
>SPAC19A8.01c |sec73|sec7c, SPAC23H3.01|guanyl-nucleotide exchange
factor Sec73 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.8 bits (54), Expect = 7.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 480 ESPSPQSKRNCATKSPETTQRKLTRSNTNQ 391
E P PQS R+ S TQR L R N+
Sbjct: 282 EQPQPQSSRSRPRSSTIPTQRTLERLRENR 311
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,057,485
Number of Sequences: 5004
Number of extensions: 56315
Number of successful extensions: 175
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 175
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 406444570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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