Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_L04
(813 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0304 + 2177044-2177046,2177173-2177235,2177323-2177460,217... 160 1e-39
04_04_0750 + 27763841-27763972,27764311-27764485,27764908-277649... 120 2e-27
02_05_0621 - 30417044-30417196,30417511-30417586,30418055-304181... 99 5e-21
03_02_1010 - 13194002-13194339,13194421-13194573,13194661-131948... 72 5e-13
03_02_0999 - 13105030-13105434,13105716-13105850,13105933-131061... 72 6e-13
03_02_0998 - 13097675-13098079,13098307-13098441,13098522-130987... 72 6e-13
07_03_1578 + 27872636-27872840,27872928-27873175,27873215-278732... 50 2e-06
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 28 7.7
02_05_0819 - 32014236-32016059 28 7.7
>07_01_0304 +
2177044-2177046,2177173-2177235,2177323-2177460,
2177886-2178778,2178935-2179005,2179132-2179234,
2180017-2180092,2180870-2180977
Length = 484
Score = 160 bits (389), Expect = 1e-39
Identities = 91/252 (36%), Positives = 138/252 (54%)
Frame = -1
Query: 804 IAPNITAIVGASTAAKILGVAGGLXKLSKMPACNVLPXGQQKKTLSGXSQATAXPHTGFI 625
IAPN++AIVG++ A+K++G AGGL L+KMPACNV G +KK L+G S AT+ G++
Sbjct: 216 IAPNLSAIVGSAVASKLMGTAGGLGALAKMPACNVQLLGAKKKNLAGFSSATSQFRVGYL 275
Query: 624 YFSQIVQDTTPELRYKAAKLVSTKLTLAARVDACHESTDGHIGRQLRENIEKKLDKLQEX 445
+++ Q T P LR A +L++ K TLAAR+++ G GR L E I KK++K QE
Sbjct: 276 EQTEVFQSTPPALRTSACRLIAAKSTLAARINSIRGDPTGKAGRNLLEEIRKKIEKWQEP 335
Query: 444 XXXXXXXXXXXPIEQSXXXXXXXXXXXXXXRYAMTEFRKNANRLNFADIEDDAYQEDLGY 265
P + RYA T+ K ANR+ F E+ + + LG
Sbjct: 336 PPAKLPKPLPVPDSEPKKKRGGRRLRKMKERYAQTDMMKLANRMQFGVPEESSLGDGLGE 395
Query: 264 TRGTIGKSSTGRIRLPQIDEKTKVRISKTXXXXXXXXXQYGGATSIRRQVSGTASSVAFT 85
G +G++ +G++R+ K +++K YG + + SG SS+AFT
Sbjct: 396 GYGMLGQAGSGKLRVSAAQSKLAAKVAK-----KFKEKSYGSSGA----TSGLTSSLAFT 446
Query: 84 PLQGLEIVNPQA 49
P+QG+E+ NPQ+
Sbjct: 447 PVQGIELSNPQS 458
>04_04_0750 +
27763841-27763972,27764311-27764485,27764908-27764998,
27764999-27765133,27765683-27765742,27765876-27765951,
27766037-27766174,27766509-27767373,27767763-27767865,
27768101-27768176,27768329-27768393,27768463-27768493,
27768618-27768725
Length = 684
Score = 120 bits (288), Expect = 2e-27
Identities = 57/122 (46%), Positives = 82/122 (67%)
Frame = -1
Query: 813 MTFIAPNITAIVGASTAAKILGVAGGLXKLSKMPACNVLPXGQQKKTLSGXSQATAXPHT 634
M +IAPN++AIVG++ A+K++G AGGL L+KMPACNV G ++K L+G S AT+
Sbjct: 414 MGYIAPNLSAIVGSAVASKLMGTAGGLGALAKMPACNVQLLGAKRKNLAGFSTATSQFRV 473
Query: 633 GFIYFSQIVQDTTPELRYKAAKLVSTKLTLAARVDACHESTDGHIGRQLRENIEKKLDKL 454
G++ + + Q T P LR +A +L++ K TLAAR+D+ G GR L E I KK++K
Sbjct: 474 GYLEQTDVFQSTPPALRTRACRLIAAKSTLAARIDSIRGDPTGKAGRNLLEEIRKKIEKW 533
Query: 453 QE 448
QE
Sbjct: 534 QE 535
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = -1
Query: 279 EDLGYTRGTIGKSSTGRIRLPQIDEKTKVRISKTXXXXXXXXXQYGGATSIRRQVSGTAS 100
+ LG G +G++ +G++R+ K +I+K YG + + SG S
Sbjct: 559 DGLGEGYGMLGQAGSGKLRVSTAPSKLSAKITKKFKEKS-----YGSSGA----TSGLTS 609
Query: 99 SVAFTPLQ 76
S+AFTP+Q
Sbjct: 610 SLAFTPVQ 617
>02_05_0621 -
30417044-30417196,30417511-30417586,30418055-30418157,
30418269-30418339,30418446-30418789,30419867-30420004,
30420089-30420151,30420392-30420489,30421049-30421179,
30422397-30422428
Length = 402
Score = 98.7 bits (235), Expect = 5e-21
Identities = 65/212 (30%), Positives = 99/212 (46%)
Frame = -1
Query: 690 GQQKKTLSGXSQATAXPHTGFIYFSQIVQDTTPELRYKAAKLVSTKLTLAARVDACHEST 511
G +KK LSG S A + G++ +++ Q T P LR A +++S K TLAAR+D+
Sbjct: 157 GAKKKNLSGFSTAASQFRVGYLEQTEVFQSTIPSLRTHACRIISAKSTLAARIDSIRGDP 216
Query: 510 DGHIGRQLRENIEKKLDKLQEXXXXXXXXXXXXPIEQSXXXXXXXXXXXXXXRYAMTEFR 331
G G L E I KK +KLQE P RYA T+
Sbjct: 217 TGKAGHSLLEEICKKTEKLQELPPAKILKPLPVPDCMPKKKRGGCRLRKMKERYAQTDMM 276
Query: 330 KNANRLNFADIEDDAYQEDLGYTRGTIGKSSTGRIRLPQIDEKTKVRISKTXXXXXXXXX 151
K ANR+ F E+ + + LG G +G++ +G++RL + +++K
Sbjct: 277 KLANRMQFGVPEESSLGDGLGKGYGLLGQAGSGKLRLLAGQSRLAAKVAKRFK------- 329
Query: 150 QYGGATSIRRQVSGTASSVAFTPLQGLEIVNP 55
+ SG S++AFTP+QG+E+ NP
Sbjct: 330 --ARSCDRSESRSGLTSTLAFTPVQGMELSNP 359
>03_02_1010 -
13194002-13194339,13194421-13194573,13194661-13194809,
13194932-13195184,13195282-13195469,13195684-13195841,
13196093-13196307,13196410-13196614
Length = 552
Score = 72.1 bits (169), Expect = 5e-13
Identities = 35/118 (29%), Positives = 63/118 (53%)
Frame = -1
Query: 813 MTFIAPNITAIVGASTAAKILGVAGGLXKLSKMPACNVLPXGQQKKTLSGXSQATAXPHT 634
M IAPN+T+++G A+++ AG L L+K PA + G +K P
Sbjct: 292 MNDIAPNLTSLIGEVVGARLISHAGSLSNLAKCPASTLQILGAEKALFRALKTRGNTPKY 351
Query: 633 GFIYFSQIVQDTTPELRYKAAKLVSTKLTLAARVDACHESTDGHIGRQLRENIEKKLD 460
G I+ S + + + + + A+ ++ K ++A+R+D ES G++LRE +E++LD
Sbjct: 352 GLIFHSSFIGRASTKNKGRMARYLANKCSIASRIDCYSESATAVFGQKLREQVEERLD 409
>03_02_0999 -
13105030-13105434,13105716-13105850,13105933-13106133,
13106374-13106673,13106764-13106964,13107246-13107410,
13107484-13107663,13108171-13108212,13108327-13108404
Length = 568
Score = 71.7 bits (168), Expect = 6e-13
Identities = 37/121 (30%), Positives = 59/121 (48%)
Frame = -1
Query: 813 MTFIAPNITAIVGASTAAKILGVAGGLXKLSKMPACNVLPXGQQKKTLSGXSQATAXPHT 634
M IAPN+TA+VG A+++ G L L+K P + G +K A P
Sbjct: 278 MNTIAPNLTALVGELVGARLIAHGGSLVNLAKQPGSTIQILGAEKALFRALKTKHATPKY 337
Query: 633 GFIYFSQIVQDTTPELRYKAAKLVSTKLTLAARVDACHESTDGHIGRQLRENIEKKLDKL 454
G IY + ++ P+ + K ++ ++ K LA R DA + D IG + R +E +L L
Sbjct: 338 GLIYHASLIGQAAPKHKGKISRSLAAKTALAIRYDALGDGEDNSIGLESRVKLETRLRVL 397
Query: 453 Q 451
+
Sbjct: 398 E 398
>03_02_0998 -
13097675-13098079,13098307-13098441,13098522-13098722,
13099060-13099359,13099449-13099649,13099932-13100096,
13100170-13100349,13100896-13100937,13101040-13101117
Length = 568
Score = 71.7 bits (168), Expect = 6e-13
Identities = 37/121 (30%), Positives = 59/121 (48%)
Frame = -1
Query: 813 MTFIAPNITAIVGASTAAKILGVAGGLXKLSKMPACNVLPXGQQKKTLSGXSQATAXPHT 634
M IAPN+TA+VG A+++ G L L+K P + G +K A P
Sbjct: 278 MNTIAPNLTALVGELVGARLIAHGGSLVNLAKQPGSTIQILGAEKALFRALKTKHATPKY 337
Query: 633 GFIYFSQIVQDTTPELRYKAAKLVSTKLTLAARVDACHESTDGHIGRQLRENIEKKLDKL 454
G IY + ++ P+ + K ++ ++ K LA R DA + D IG + R +E +L L
Sbjct: 338 GLIYHASLIGQAAPKHKGKISRSLAAKTALAIRYDALGDGEDNSIGLESRVKLETRLRVL 397
Query: 453 Q 451
+
Sbjct: 398 E 398
>07_03_1578 +
27872636-27872840,27872928-27873175,27873215-27873295,
27873665-27873822,27874391-27874450,27874655-27874873,
27875100-27875201,27875352-27875500,27875582-27875734,
27875839-27876194
Length = 576
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/101 (25%), Positives = 49/101 (48%)
Frame = -1
Query: 762 AKILGVAGGLXKLSKMPACNVLPXGQQKKTLSGXSQATAXPHTGFIYFSQIVQDTTPELR 583
A+++ AG L L+K A + G +K P G I+ S + + +
Sbjct: 327 ARLISHAGSLSNLAKCAASTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASTRNK 386
Query: 582 YKAAKLVSTKLTLAARVDACHESTDGHIGRQLRENIEKKLD 460
+ A+ ++ K ++A+R+D E G++LRE +E++LD
Sbjct: 387 GRIARYLANKCSIASRIDCYSELNTSVFGQKLREQVEERLD 427
>10_08_0253 - 16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -1
Query: 342 TEFRKNANRLNFADIEDDAYQED--LGYTRGTIGKSSTGRIRLPQIDEKTKVR 190
T +NAN L +I+ D Y +D G T T G + + P DEKT +R
Sbjct: 4795 TNKSENANNLEHREIQTDTYVQDSVQGETDETFGDFVS--FKQPPADEKTVMR 4845
>02_05_0819 - 32014236-32016059
Length = 607
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -3
Query: 409 DRTKQEEERRQTCQEDEGALRYDRVQEERQ 320
D + E+RR++ +E E + DR++EER+
Sbjct: 377 DLEQPREQRRESREEREARIERDRIREERR 406
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,364,906
Number of Sequences: 37544
Number of extensions: 327080
Number of successful extensions: 990
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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