Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_L04
(813 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical... 210 9e-55
AF043704-1|AAK21475.1| 487|Caenorhabditis elegans Hypothetical ... 73 3e-13
U58753-1|AAC24437.2| 814|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 28 6.9
>AC006708-15|AAF60425.1| 504|Caenorhabditis elegans Hypothetical
protein Y110A7A.8 protein.
Length = 504
Score = 210 bits (513), Expect = 9e-55
Identities = 107/259 (41%), Positives = 156/259 (60%), Gaps = 2/259 (0%)
Frame = -1
Query: 813 MTFIAPNITAIVGASTAAKILGVAGGLXKLSKMPACNVLPXGQQKKTLSGXSQATAXPHT 634
M IAPN+ A++G++T A ++ AGGL L+ MP+CNV G+ KK L G S + PH
Sbjct: 221 MALIAPNLVALLGSTTTAHLVSQAGGLSPLATMPSCNVQVLGKTKKNLIGFSTVSTNPHH 280
Query: 633 GFIYFSQIVQDTTPELRYKAAKLVSTKLTLAARVDACHESTDGHIGRQLRENIEKKLDKL 454
GFIYF Q+VQ P+L+ KAAK+++ K+TL AR+DA HES++G G + +E K +K+
Sbjct: 281 GFIYFHQLVQKMPPDLKNKAAKILAAKVTLVARIDAQHESSNGEKGAEFLALVESKFEKM 340
Query: 453 QEXXXXXXXXXXXXPIEQSXXXXXXXXXXXXXXRYAMTEFRKNANRLNFADIEDDAYQED 274
E P++++ R MT+ RK+ANR+NF ++ +D QE
Sbjct: 341 LEPPPVKANKALPKPLDKASKKRGGRRTRKMKERLGMTDLRKSANRMNFGELGEDVMQEH 400
Query: 273 LGYTRGTI--GKSSTGRIRLPQIDEKTKVRISKTXXXXXXXXXQYGGATSIRRQVSGTAS 100
+G+ G + G + GRIR +D+KT+ R+S+ GG TSIR +++GTAS
Sbjct: 401 MGFDIGQVKTGNVTGGRIRTAAVDQKTRARMSQKMMRQMERQKAAGGMTSIRSKMAGTAS 460
Query: 99 SVAFTPLQGLEIVNPQAAE 43
SV FTP+QGLEI+NP A E
Sbjct: 461 SVTFTPIQGLEIINPAAQE 479
>AF043704-1|AAK21475.1| 487|Caenorhabditis elegans Hypothetical
protein W01B11.3 protein.
Length = 487
Score = 72.5 bits (170), Expect = 3e-13
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Frame = -1
Query: 813 MTFIAPNITAIVGASTAAKILGVAGGLXKLSKMPACNVLPXGQQKKTLSGXSQATAXPHT 634
MT +APN+T ++G A+++ AG L L+K PA + G +K P
Sbjct: 277 MTALAPNLTVLLGELVGARLISHAGSLVSLAKAPASTIQILGAEKALFRALKTKKDTPKY 336
Query: 633 GFIYFSQIVQDTTPELRYKAAKLVSTKLTLAARVDA-CHESTDGHIGRQLRENIEKKL 463
G IY +Q++ P+++ K A+ ++ K +LA R+DA ES IG + R +E L
Sbjct: 337 GLIYHAQLITQAPPKVKGKMARKLAAKCSLATRIDALSDESATNEIGIECRAALENVL 394
>U58753-1|AAC24437.2| 814|Caenorhabditis elegans Hypothetical
protein W03B1.2 protein.
Length = 814
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = -3
Query: 766 SSKNPWCGRWIV*IIKDASV*CVTXRATEEDTVRLXASNSXTSYWVHLF 620
S KN W G W++ I + C T+R S +++HLF
Sbjct: 429 SDKNFWSGAWVLIPITLELLYCALFAIATVSTLRFFHSIQSLGFFIHLF 477
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = -1
Query: 579 KAAKLVSTKLTLAARVDACHESTDGHIGRQLRENIEKKLDKLQE 448
+A KLV + A+ + IGR+L +N+E+K+++++E
Sbjct: 2021 EARKLVQDAVESASEYKKQAVDSGDEIGRELLDNVEQKIEQVKE 2064
>Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical
protein W06A7.3d protein.
Length = 570
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = -1
Query: 579 KAAKLVSTKLTLAARVDACHESTDGHIGRQLRENIEKKLDKLQE 448
+A KLV + A+ + IGR+L +N+E+K+++++E
Sbjct: 107 EARKLVQDAVESASEYKKQAVDSGDEIGRELLDNVEQKIEQVKE 150
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = -1
Query: 579 KAAKLVSTKLTLAARVDACHESTDGHIGRQLRENIEKKLDKLQE 448
+A KLV + A+ + IGR+L +N+E+K+++++E
Sbjct: 2021 EARKLVQDAVESASEYKKQAVDSGDEIGRELLDNVEQKIEQVKE 2064
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = -1
Query: 579 KAAKLVSTKLTLAARVDACHESTDGHIGRQLRENIEKKLDKLQE 448
+A KLV + A+ + IGR+L +N+E+K+++++E
Sbjct: 2021 EARKLVQDAVESASEYKKQAVDSGDEIGRELLDNVEQKIEQVKE 2064
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,384,282
Number of Sequences: 27780
Number of extensions: 277303
Number of successful extensions: 812
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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