Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_L03
(848 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 42 3e-05
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 37 9e-04
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 28 0.41
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 27 0.54
AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein. 27 0.54
AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 27 0.72
AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase ... 25 2.2
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 25 2.9
AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein p... 25 3.8
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 24 5.1
AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein. 24 6.7
AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein pr... 24 6.7
AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein. 24 6.7
AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein. 24 6.7
AF387850-1|AAL58705.1| 209|Anopheles gambiae integrase protein. 24 6.7
AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein p... 24 6.7
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 23 8.9
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 23 8.9
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 41.5 bits (93), Expect = 3e-05
Identities = 20/81 (24%), Positives = 41/81 (50%)
Frame = -3
Query: 846 KDLEEKEKQLTATEAEVAALNRKVQQIEEDLEKXEERSGTAQQKLLEAQQSADENNRMCK 667
K+ ++ E+ + E+ L + + +E K EE+ QQ+L+E + DE
Sbjct: 808 KNWKKHEQDFETLKLEIEELQKGIVTAKEQAVKLEEQIAALQQRLVEVSGTTDEMTAAVT 867
Query: 666 VLENRAQQDEERMDQLTNQLK 604
L+ + +Q +E+M+ + +LK
Sbjct: 868 ALKQQIKQHKEKMNSQSKELK 888
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 36.7 bits (81), Expect = 9e-04
Identities = 15/49 (30%), Positives = 33/49 (67%)
Frame = -2
Query: 550 KLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQ 404
K+ +EDE+E A+ ++ G+ + ++LEEE + L+ ++++ EKA++
Sbjct: 936 KINSMEDEVEAAQSAIRKGNDERTQLEEEANKLREELEEMKLAIEKAHE 984
Score = 29.5 bits (63), Expect = 0.14
Identities = 19/81 (23%), Positives = 33/81 (40%)
Frame = -3
Query: 846 KDLEEKEKQLTATEAEVAALNRKVQQIEEDLEKXEERSGTAQQKLLEAQQSADENNRMCK 667
+ LE TE ++ ++Q +EE L TA+QKL E E + +
Sbjct: 506 RKLESLRYSYEETEKDLEEKRARLQTLEEALPVTRTELETAKQKLQENANEERELTQTLR 565
Query: 666 VLENRAQQDEERMDQLTNQLK 604
++ + Q+ M +Q K
Sbjct: 566 AVQGKLQESMAAMQSTRSQGK 586
Score = 25.4 bits (53), Expect = 2.2
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -2
Query: 565 DEVS--RKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVS-EEKANQRVE 395
DEV+ RKL + E E ++ A++ LEE L V L++ + +E AN+ E
Sbjct: 500 DEVTERRKLESLRYSYEETEKDLEEKRARLQTLEEALPVTRTELETAKQKLQENANEERE 559
Score = 24.6 bits (51), Expect = 3.8
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -3
Query: 738 RSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKE 601
R GT+ Q A + A ++R + ++ RAQ+ + +++ L Q E
Sbjct: 750 RMGTSVQTKTSASEPAGASSREIEQMQIRAQEIQTQINYLQEQQGE 795
Score = 23.4 bits (48), Expect = 8.9
Identities = 14/97 (14%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = -2
Query: 511 DRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRVEEFXXXXXXXXXXXKXXXXXXX 332
++V++ +AK++E ++ +++ + ++ +++ E
Sbjct: 850 EKVRALEAKVAECKQAFDSSSTKADAMQKNVDRYTEQINEITNSKVKVLQTKINGLGKQI 909
Query: 331 XXEKT-VKKLQKEVDRLEDELGINKDRYKSLADEMDS 224
+ KL E+ E + +KD+ S+ DE+++
Sbjct: 910 DKLSANISKLTVEIKTSERNVQKSKDKINSMEDEVEA 946
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 27.9 bits (59), Expect = 0.41
Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 4/127 (3%)
Frame = -3
Query: 813 ATEAEVAALNRKVQQIEEDLEKXEERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEE 634
+T E+ L +QQ+EE + +E++ +++ Q E K E + + E
Sbjct: 88 STTPELELLKATIQQLEEQNLEMKEQNFRLAEQITRMCQLLQEEKEEAKRREEKLKAQME 147
Query: 633 RM---DQLTNQLKEARLLAEDADGNPTRFRENWPS-LKTNSKSPKTVSSLVTLRSQSLKK 466
++ Q L + L A+ A G P+ P+ L S + R+Q ++
Sbjct: 148 KLAAAHQRDRNLLNSLLAAKVAGGQPSASSRQPPTPLPRRSSAQPQQQQQQQQRNQQEQE 207
Query: 465 N*RSSVT 445
R+S +
Sbjct: 208 QPRASTS 214
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 27.5 bits (58), Expect = 0.54
Identities = 13/53 (24%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = -3
Query: 831 KEKQLTATEAEVAALNRK----VQQIEEDLEKXEERSGTAQQKLLEAQQSADE 685
++K+L ++A+ A+ ++ + +EE E+ E+ +++L++A ADE
Sbjct: 274 RKKELETSKAKQVAIGQRSTDEINSLEEKTERLEDTISKQKRELMDALAKADE 326
>AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein.
Length = 406
Score = 27.5 bits (58), Expect = 0.54
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -3
Query: 843 DLEEKEKQLTATEAEVAALNRKVQQIEEDLEKXEERSGTAQQKLLEAQQSADENNRMCKV 664
DLEE +K + A+ E +KV+ +E E+ + A ++ + + D+ +
Sbjct: 332 DLEEAKK-VAASVKETQEGEKKVKDAQEAEERKKAEGEAAAEEAAKDDEDEDDEDDADNA 390
Query: 663 LENRAQQ-DEERMDQL 619
L A + D+E D+L
Sbjct: 391 LPGEATELDDEGHDEL 406
>AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein
protein.
Length = 527
Score = 27.1 bits (57), Expect = 0.72
Identities = 17/76 (22%), Positives = 36/76 (47%)
Frame = -3
Query: 834 EKEKQLTATEAEVAALNRKVQQIEEDLEKXEERSGTAQQKLLEAQQSADENNRMCKVLEN 655
E + L +A+ V+++EE ++ + + ++L EAQ+ A E +V E
Sbjct: 70 EVRRMLADAKADNETTVGIVKRLEEQIQLLRLQMEASNEQLKEAQREAREAREDARVREA 129
Query: 654 RAQQDEERMDQLTNQL 607
+++ + +L N L
Sbjct: 130 EHREELRKEKELFNAL 145
>AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase
protein.
Length = 849
Score = 25.4 bits (53), Expect = 2.2
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = -2
Query: 667 SVGEQGTAGRGAYGPAHQPIEXXXXXXXXXXRKSDEVSRKLAFVEDELEVAEDRVKSGDA 488
SV E G G + + + R+ DE+ RKL +VE EV +D V+ +
Sbjct: 25 SVSELGETGAVQFRDLNADVNAFQRKFVSEVRRCDEMERKLRYVEG--EVKKDSVQIPEC 82
Query: 487 KISE 476
+ +
Sbjct: 83 SVDD 86
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 25.0 bits (52), Expect = 2.9
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 10/83 (12%)
Frame = -3
Query: 840 LEEKEKQLTATEAEVAALNRKVQQIEEDLEK-------XEERSGTAQQKL--LEAQQSAD 688
+EE+E ++ EA VA + + D+E +E GT ++ L ++A+Q+A
Sbjct: 342 IEEQEHRIRNREALVAKTDSTIDTYRADIESKKQEYVALKEAYGTVRRTLQDVQAKQAAI 401
Query: 687 ENN-RMCKVLENRAQQDEERMDQ 622
E R R Q+D +++Q
Sbjct: 402 ERGMRNASERVTRIQKDARQIEQ 424
>AB090815-1|BAC57905.1| 492|Anopheles gambiae gag-like protein
protein.
Length = 492
Score = 24.6 bits (51), Expect = 3.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 674 CAKCWRTGH 648
C KCW TGH
Sbjct: 418 CFKCWETGH 426
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 24.2 bits (50), Expect = 5.1
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = -3
Query: 792 ALNRKVQQIEEDLEKXEERSGTAQQKLLEAQQSADE-NNRMCKVLENRAQQDEE--RMD- 625
A ++ ++ + E ++R+ + + AD+ N R+ K +NR ++ E R D
Sbjct: 1443 AQDKYAEEASKLAENIKKRANATKNTARDLHHEADQLNGRLAKT-DNRLEEREAQIRKDL 1501
Query: 624 QLTNQLKE 601
LTN+ KE
Sbjct: 1502 NLTNEAKE 1509
>AY645022-1|AAT92558.1| 165|Anopheles gambiae hairy protein.
Length = 165
Score = 23.8 bits (49), Expect = 6.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 390 NSSTRWLAFSSDTSRDLRELPTTFNSSSSSEILASPD 500
NSST +L +S ++ SSSSS +SPD
Sbjct: 97 NSSTGYLHQHQQSSSSSSSSSSSSMSSSSSSSFSSPD 133
>AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein
protein.
Length = 942
Score = 23.8 bits (49), Expect = 6.7
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = -3
Query: 768 IEEDLEKXEERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLL 589
+ + LE EE S + L+E ++ D ++ MC D +++ +L R
Sbjct: 338 VGDRLESEEEDS--TDETLIE-EELTDTDSSMCDSTNEDDGDDGHTLERAAEELTVRRSS 394
Query: 588 AEDADGNPTRFRE 550
P RFRE
Sbjct: 395 RSTKGVPPQRFRE 407
>AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein.
Length = 209
Score = 23.8 bits (49), Expect = 6.7
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = -3
Query: 768 IEEDLEKXEERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLL 589
+ + LE EE S + L+E ++ D ++ MC D +++ +L R
Sbjct: 108 VGDRLESEEEDS--TDETLIE-EELTDTDSSMCDSTNEDDGDDGHTLERAAEELTVRRSS 164
Query: 588 AEDADGNPTRFRE 550
P RFRE
Sbjct: 165 RSTKGVPPQRFRE 177
>AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein.
Length = 215
Score = 23.8 bits (49), Expect = 6.7
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = -3
Query: 768 IEEDLEKXEERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLL 589
+ + LE EE S + L+E ++ D ++ MC D +++ +L R
Sbjct: 114 VGDRLESEEEDS--TDETLIE-EELTDTDSSMCDSTNEDDGDDGHTLERAAEELTVRRSS 170
Query: 588 AEDADGNPTRFRE 550
P RFRE
Sbjct: 171 RSTKGVPPQRFRE 183
>AF387850-1|AAL58705.1| 209|Anopheles gambiae integrase protein.
Length = 209
Score = 23.8 bits (49), Expect = 6.7
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = -3
Query: 768 IEEDLEKXEERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLL 589
+ + LE EE S + L+E ++ D ++ MC D +++ +L R
Sbjct: 108 VGDRLESEEEDS--TDETLIE-EELTDTDSSMCDSTNEDDGDDGHTLERAAEELTVRRSS 164
Query: 588 AEDADGNPTRFRE 550
P RFRE
Sbjct: 165 RSTKGVPPQRFRE 177
>AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein
protein.
Length = 344
Score = 23.8 bits (49), Expect = 6.7
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -1
Query: 674 CAKCWRTGHS 645
C KCW+ GH+
Sbjct: 277 CYKCWKVGHT 286
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 23.4 bits (48), Expect = 8.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 621 AGPYAPRPAVPCSPTLCTY 677
A P PR +V C PT C +
Sbjct: 1 ARPQRPRLSVTCRPTKCLH 19
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 23.4 bits (48), Expect = 8.9
Identities = 12/61 (19%), Positives = 29/61 (47%)
Frame = -3
Query: 792 ALNRKVQQIEEDLEKXEERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTN 613
+L +++Q + LEK + + A QKL + N + +A++ + +++ N
Sbjct: 1005 SLAKELQSKLDTLEKIQTPNMKAMQKLDRVTEKIQSTNEEFEAARKKAKKAKAAFEKVKN 1064
Query: 612 Q 610
+
Sbjct: 1065 E 1065
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,959
Number of Sequences: 2352
Number of extensions: 10722
Number of successful extensions: 61
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -