Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_L02
         (739 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.4  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    22   5.9  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   5.9  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   5.9  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   5.9  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   5.9  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   5.9  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = -3

Query: 599  KKLEKSSESMITGPLTQRLVSALMEENVMSYEIPDIKVKMVSTTKSG 459
            K+ E+S  ++ T   T    S     N++  E+P++   +    KSG
Sbjct: 863  KRTERSDSALFTCVATNAFGSDDTSINMIVQEVPEVPYGLKVLDKSG 909


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = -3

Query: 329 CQTELTAVRKENCRNLKNLIGLCKQEMIRLNLXKQL 222
           C   ++ + +E C  L + I L K+E   L   +++
Sbjct: 14  CVYSVSEISEETCETLMSDINLIKEEFDELGRLQRI 49


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 527 P*EQRLIFVSKVQLSCFLMTFLA 595
           P E+ LIFV   + + FL TFL+
Sbjct: 408 PNERTLIFVETKRNADFLATFLS 430


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = -3

Query: 464 SGYKNSLTLXKC-LRKELVEQ-GILDPEDLPPLT 369
           +G++  +    C L+   V Q G+L P   PPLT
Sbjct: 125 NGHQTQVVYASCKLQAAAVTQNGVLGPTGSPPLT 158


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -3

Query: 149 TKKEKEDAWKAINEQIRLNKEINALPQT 66
           T +   + W  ++   R +KEI+ LP++
Sbjct: 223 TNRTSVEGWTDVSNVKRKSKEISKLPKS 250


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -3

Query: 149 TKKEKEDAWKAINEQIRLNKEINALPQT 66
           T +   + W  ++   R +KEI+ LP++
Sbjct: 223 TNRTSVEGWTDVSNVKRKSKEISKLPKS 250


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = -3

Query: 464 SGYKNSLTLXKC-LRKELVEQ-GILDPEDLPPLT 369
           +G++  +    C L+   V Q G+L P   PPLT
Sbjct: 127 NGHQTQVVYDSCKLQAAAVTQNGVLGPTGSPPLT 160


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,210
Number of Sequences: 336
Number of extensions: 2725
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)