Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_K21
         (796 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021497-8|CAA16409.1|  334|Caenorhabditis elegans Hypothetical ...    33   0.31 
Z75952-5|CAB00093.2|  149|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z49886-6|CAI79131.1|  149|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z49886-5|CAA90055.1|  152|Caenorhabditis elegans Hypothetical pr...    30   2.2  
U49956-4|AAK77620.1| 1117|Caenorhabditis elegans Variable abnorm...    30   2.2  
U49956-3|AAK77621.1| 1122|Caenorhabditis elegans Variable abnorm...    30   2.2  
AF040269-1|AAC38970.1| 1122|Caenorhabditis elegans Eph receptor ...    30   2.2  
Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AL110478-12|CAM33509.1|  108|Caenorhabditis elegans Hypothetical...    29   3.8  
AL110478-9|CAB54343.2|  113|Caenorhabditis elegans Hypothetical ...    29   3.8  
Z73976-2|CAA98285.1|  360|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z68342-3|CAA92773.1|  751|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AC006729-7|AAF60463.1|  157|Caenorhabditis elegans Hypothetical ...    28   8.9  

>AL021497-8|CAA16409.1|  334|Caenorhabditis elegans Hypothetical
           protein Y51A2D.12 protein.
          Length = 334

 Score = 32.7 bits (71), Expect = 0.31
 Identities = 15/59 (25%), Positives = 30/59 (50%)
 Frame = +1

Query: 97  NAIGMLKYYNINKLCIKFIEDTQLTKTTTCYSVII*MTSVDISNVYNSNFEQGQQCYFI 273
           N +  ++ YN+ K  +K  E +  +   T + + + +TS+ +SN Y +N   G    F+
Sbjct: 200 NVLAGIRLYNMKKKGVKVPETSLFSMAFTVFVIDLFLTSLTVSNYYLTNLAIGSDSDFV 258


>Z75952-5|CAB00093.2|  149|Caenorhabditis elegans Hypothetical
           protein F29D10.2 protein.
          Length = 149

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -2

Query: 564 PPECSPSCVTCHCSSCGTIC*PIC 493
           P  C   C TC C+ C T C P C
Sbjct: 79  PKCCCTCCRTCCCTRCCTCCRPCC 102


>Z49886-6|CAI79131.1|  149|Caenorhabditis elegans Hypothetical
           protein C06A1.7 protein.
          Length = 149

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -2

Query: 564 PPECSPSCVTCHCSSCGTIC*PIC 493
           P  C   C TC C+ C T C P C
Sbjct: 81  PKCCCTCCRTCCCTRCCTCCRPCC 104


>Z49886-5|CAA90055.1|  152|Caenorhabditis elegans Hypothetical
           protein C06A1.6 protein.
          Length = 152

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -2

Query: 564 PPECSPSCVTCHCSSCGTIC*PIC 493
           P  C   C TC C+ C T C P C
Sbjct: 84  PKCCCTCCRTCCCTRCCTCCRPCC 107


>U49956-4|AAK77620.1| 1117|Caenorhabditis elegans Variable abnormal
           morphology protein1, isoform a protein.
          Length = 1117

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -2

Query: 210 RHLNNDAIACCSFSQLSVFNKLNAQFINIIVFKHSYCIFLSFYSRDC 70
           +H N  A   C++  ++  N L + FI +   +  Y I L F +RDC
Sbjct: 73  KHANQRAYVTCNYDMINPSNWLFSHFIEVKTARRIY-IELLFNTRDC 118


>U49956-3|AAK77621.1| 1122|Caenorhabditis elegans Variable abnormal
           morphology protein1, isoform b protein.
          Length = 1122

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -2

Query: 210 RHLNNDAIACCSFSQLSVFNKLNAQFINIIVFKHSYCIFLSFYSRDC 70
           +H N  A   C++  ++  N L + FI +   +  Y I L F +RDC
Sbjct: 73  KHANQRAYVTCNYDMINPSNWLFSHFIEVKTARRIY-IELLFNTRDC 118


>AF040269-1|AAC38970.1| 1122|Caenorhabditis elegans Eph receptor
           tyrosine kinase protein.
          Length = 1122

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -2

Query: 210 RHLNNDAIACCSFSQLSVFNKLNAQFINIIVFKHSYCIFLSFYSRDC 70
           +H N  A   C++  ++  N L + FI +   +  Y I L F +RDC
Sbjct: 73  KHANQRAYVTCNYDMINPSNWLFSHFIEVKTARRIY-IELLFNTRDC 118


>Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical
           protein R13H4.8 protein.
          Length = 212

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2

Query: 555 CSPSCVTCHCSSCGTIC*PIC 493
           C   C TC C+ C T C P C
Sbjct: 100 CCTCCRTCCCTRCCTCCRPCC 120


>Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical
           protein T01B7.8 protein.
          Length = 164

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2

Query: 555 CSPSCVTCHCSSCGTIC*PIC 493
           C   C TC C+ C T C P C
Sbjct: 98  CCTCCRTCCCTRCCTCCRPCC 118


>U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical
           protein C27A2.5 protein.
          Length = 188

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2

Query: 555 CSPSCVTCHCSSCGTIC*PIC 493
           C   C TC C+ C T C P C
Sbjct: 99  CCTCCRTCCCTRCCTCCRPCC 119


>U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical
           protein C04G6.10 protein.
          Length = 166

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2

Query: 555 CSPSCVTCHCSSCGTIC*PIC 493
           C   C TC C+ C T C P C
Sbjct: 99  CCTCCRTCCCTRCCTCCRPCC 119


>U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G6.7 protein.
          Length = 197

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2

Query: 555 CSPSCVTCHCSSCGTIC*PIC 493
           C   C TC C+ C T C P C
Sbjct: 100 CCTCCRTCCCTRCCTCCRPCC 120


>AL110478-12|CAM33509.1|  108|Caenorhabditis elegans Hypothetical
           protein Y26D4A.17 protein.
          Length = 108

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -2

Query: 156 FNKLNAQFINIIVFKHSYCIFLSFYSRDCFYSIVIFHRLLFFEYI 22
           F K+   F  I  F   Y  FL F+  + F  I+  + + FFEYI
Sbjct: 39  FEKVKKIFDKINQFYILYFSFLRFHELNHFPLIICIYLIFFFEYI 83


>AL110478-9|CAB54343.2|  113|Caenorhabditis elegans Hypothetical
           protein Y26D4A.5 protein.
          Length = 113

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -2

Query: 156 FNKLNAQFINIIVFKHSYCIFLSFYSRDCFYSIVIFHRLLFFEYI 22
           F K+   F  I  F   Y  FL F+  + F  I+  + + FFEYI
Sbjct: 44  FEKVKKIFDKINQFYILYFSFLRFHELNHFPLIICIYLIFFFEYI 88


>Z73976-2|CAA98285.1|  360|Caenorhabditis elegans Hypothetical
           protein T07C12.6 protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -3

Query: 704 FHIIYVSMFRELKICVKRNLSLLXVDEYRSSPLVRWV 594
           +H I+  +F  L IC++R  + + +D Y  S  + W+
Sbjct: 133 WHYIFSMLFGILAICIERIFASMLIDNYEKSTQI-WI 168


>Z68342-3|CAA92773.1|  751|Caenorhabditis elegans Hypothetical
           protein F38E11.4 protein.
          Length = 751

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = -1

Query: 769 SLRCV--FFEIQANRVFQRNFNTVFTLSMYQCL 677
           +L+C+   FE+ ANR+    + T+  LS ++CL
Sbjct: 308 NLQCIEASFELVANRMMTSAYKTISALSQHECL 340


>AC006729-7|AAF60463.1|  157|Caenorhabditis elegans Hypothetical
           protein Y24D9A.6 protein.
          Length = 157

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 156 FNKLNAQFINIIVFKHSYCIFLSFYSRDCFYSIVIF 49
           + K N QFI  ++F  S  +   FYS+ CF   + F
Sbjct: 4   YRKKNGQFIFCLIFMCSSPLKKIFYSKTCFTHFLSF 39


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,608,904
Number of Sequences: 27780
Number of extensions: 297703
Number of successful extensions: 845
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)