Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_K07
(840 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 22 6.1
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 6.1
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 6.1
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 8.1
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 8.1
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 8.1
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 8.1
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 8.1
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 8.1
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 8.1
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 8.1
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 8.1
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 8.1
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 8.1
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 8.1
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 8.1
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 8.1
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 22 8.1
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 8.1
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 8.1
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 22 8.1
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 8.1
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 22.2 bits (45), Expect = 6.1
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 503 QLVAKIFKRVIFIQSVKAAITCVYAQGIFTQHTRMATTHNVLH 631
+L+AK + R F + ++I Y IF Q + + +LH
Sbjct: 158 KLIAKHYLRTWFFLDLISSIPLDYIFLIFNQFQDFSESFQILH 200
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.2 bits (45), Expect = 6.1
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 503 QLVAKIFKRVIFIQSVKAAITCVYAQGIFTQHTRMATTHNVLH 631
+L+AK + R F + ++I Y IF Q + + +LH
Sbjct: 158 KLIAKHYLRTWFFLDLISSIPLDYIFLIFNQFQDFSESFQILH 200
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 22.2 bits (45), Expect = 6.1
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 503 QLVAKIFKRVIFIQSVKAAITCVYAQGIFTQHTRMATTHNVLH 631
+L+AK + R F + ++I Y IF Q + + +LH
Sbjct: 158 KLIAKHYLRTWFFLDLISSIPLDYIFLIFNQFQDFSESFQILH 200
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 371 FQHTSSAACRQRGAS 415
FQHTSS R+R S
Sbjct: 213 FQHTSSRYSRERSCS 227
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 371 FQHTSSAACRQRGAS 415
FQHTSS R+R S
Sbjct: 213 FQHTSSRYSRERSCS 227
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 371 FQHTSSAACRQRGAS 415
FQHTSS R+R S
Sbjct: 224 FQHTSSRYSRERSCS 238
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 371 FQHTSSAACRQRGAS 415
FQHTSS R+R S
Sbjct: 224 FQHTSSRYSRERSCS 238
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 371 FQHTSSAACRQRGAS 415
FQHTSS R+R S
Sbjct: 224 FQHTSSRYSRERSCS 238
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 371 FQHTSSAACRQRGAS 415
FQHTSS R+R S
Sbjct: 213 FQHTSSRYSRERSCS 227
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 371 FQHTSSAACRQRGAS 415
FQHTSS R+R S
Sbjct: 224 FQHTSSRYSRERSCS 238
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 371 FQHTSSAACRQRGAS 415
FQHTSS R+R S
Sbjct: 224 FQHTSSRYSRERSCS 238
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 371 FQHTSSAACRQRGAS 415
FQHTSS R+R S
Sbjct: 213 FQHTSSRYSRERSCS 227
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 371 FQHTSSAACRQRGAS 415
FQHTSS R+R S
Sbjct: 224 FQHTSSRYSRERSCS 238
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 371 FQHTSSAACRQRGAS 415
FQHTSS R+R S
Sbjct: 224 FQHTSSRYSRERSCS 238
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 371 FQHTSSAACRQRGAS 415
FQHTSS R+R S
Sbjct: 224 FQHTSSRYSRERSCS 238
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 371 FQHTSSAACRQRGAS 415
FQHTSS R+R S
Sbjct: 224 FQHTSSRYSRERSCS 238
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 371 FQHTSSAACRQRGAS 415
FQHTSS R+R S
Sbjct: 213 FQHTSSRYSRERSCS 227
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 371 FQHTSSAACRQRGAS 415
FQHTSS R+R S
Sbjct: 229 FQHTSSRYSRERSCS 243
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 371 FQHTSSAACRQRGAS 415
FQHTSS R+R S
Sbjct: 224 FQHTSSRYSRERSCS 238
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 371 FQHTSSAACRQRGAS 415
FQHTSS R+R S
Sbjct: 224 FQHTSSRYSRERSCS 238
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 371 FQHTSSAACRQRGAS 415
FQHTSS R+R S
Sbjct: 224 FQHTSSRYSRERSCS 238
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.8 bits (44), Expect = 8.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2
Query: 371 FQHTSSAACRQRGAS 415
FQHTSS R+R S
Sbjct: 224 FQHTSSRYSRERSCS 238
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,777
Number of Sequences: 438
Number of extensions: 4192
Number of successful extensions: 36
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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