Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_J24
(797 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyce... 39 0.001
SPAC31G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 32 0.083
SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr 3... 32 0.11
SPCC191.09c |gst1||glutathione S-transferase Gst1|Schizosaccharo... 31 0.25
SPCC965.07c |gst2||glutathione S-transferase Gst2|Schizosaccharo... 30 0.33
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 28 1.8
SPAC688.08 |srb8|med12|mediator complex subunit Srb8 |Schizosacc... 27 4.1
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 27 4.1
SPBC56F2.12 |ilv5||acetohydroxyacid reductoisomerase|Schizosacch... 26 7.2
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 25 9.5
SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2 |S... 25 9.5
SPBC1778.04 |spo6||Spo4-Spo6 kinase complex regulatory subunit S... 25 9.5
>SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 242
Score = 38.7 bits (86), Expect = 0.001
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = -1
Query: 608 LQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKRWYETVKSTAPGY 429
L +D L +Y AG T AD + + + + + K Y N+KRW V S P
Sbjct: 148 LDYIDNHLASNEYFAGEQFTAADPQMCFPIFAAQRDYLSQKPYKNIKRWMRVV-SDRPAC 206
Query: 428 QEANEK 411
+ A EK
Sbjct: 207 RIAAEK 212
>SPAC31G5.06 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 32.3 bits (70), Expect = 0.083
Identities = 16/48 (33%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = -2
Query: 412 KDWRHSRDLSIACLKSE-HLSTRNENLFKITSLELNLTN*AELKRHCL 272
K+ H++ +S+ CL S+ +L ++ +FK ++ELN N ++KR+ L
Sbjct: 58 KNHLHNKHVSLYCLLSDRYLQPPSKRIFKRWNMELNNLNCPDIKRYIL 105
>SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr
3|||Manual
Length = 334
Score = 31.9 bits (69), Expect = 0.11
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Frame = -1
Query: 635 AKNEKVQEALQLLDKFLEGQ----KYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVK 468
A+ K+ +AL+ ++ E Q KY P L LS A+ S+ S + +
Sbjct: 116 AEKRKILDALKSRKEYFETQALLEKYGEQPTLAQKKLSNAAAAKSVPGSSSSSSDPMHPQ 175
Query: 467 RWYETVKSTAPGYQEANEKGLEA 399
WY+ V G E +E EA
Sbjct: 176 HWYDRVLEGLVGANENSENNREA 198
>SPCC191.09c |gst1||glutathione S-transferase
Gst1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 229
Score = 30.7 bits (66), Expect = 0.25
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Frame = -1
Query: 797 YLVNKYXKGSSL-YPEDPKARVLVDQRLYFDI---GTLYQRFSDY-FYPQVFAGAPADKA 633
YL +KY + P D V Q L+F G ++ + + Y Q + +
Sbjct: 77 YLADKYDTERKISLPRDHPEYYKVIQYLFFQASGQGIIWGQAGWFSVYHQELVISAITRY 136
Query: 632 KNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLE 507
+NE ++ L +L+ L+ + Y+ T+ADLS I+ + LE
Sbjct: 137 RNE-IKRVLGVLEDILKDRDYLVANRFTIADLSFISWNNFLE 177
>SPCC965.07c |gst2||glutathione S-transferase
Gst2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 230
Score = 30.3 bits (65), Expect = 0.33
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Frame = -1
Query: 797 YLVNKYX--KGSSLYPEDPKARVLVDQRLYFDI---GTLYQR--FSDYFYPQVFAGAPAD 639
YL +KY + SL +DP+ L+ Q L+F G ++ + + ++F+ + A
Sbjct: 77 YLADKYDTDRKISLSFDDPEYYKLI-QYLFFQASGQGVIWGQAGWFNFFHHEPVVSA-VT 134
Query: 638 KAKNEKVQEALQLLDKFLEGQKYVAGPNLTVADLSLI 528
+ +NE ++ L +L+ L+ + Y+ T+ADLS I
Sbjct: 135 RYRNE-IKRVLGVLEDILKDRDYLVANKYTIADLSFI 170
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 363 SLFKHAIDKSLECLQSFLVGLLVTRSCTLNRLVPS 467
S +K++++ L CL +L+ +TRS T+ + V S
Sbjct: 51 SWYKYSLESGLVCLYLYLIYRWITRSFTVKQTVGS 85
>SPAC688.08 |srb8|med12|mediator complex subunit Srb8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1233
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/50 (24%), Positives = 26/50 (52%)
Frame = +3
Query: 66 CXRDXGIL*NSIIQTSTGISKWVSHDKKRNVSIKCEQIILNLLIYFQAKG 215
C D + N+ + + +W+ KK+ + +CE +IL++L + + G
Sbjct: 1138 CQHDDYLQENTSSKNNLLQKEWILITKKKVILEQCEYVILDILNFLKFSG 1187
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 476 NVKRWYETVKSTAPGYQEANEKGLEAFKGLVNS 378
+V + YE+++S Y+ ANEK EA +V+S
Sbjct: 739 SVHKNYESLRSQLLEYKAANEKHTEAILSVVSS 771
>SPBC56F2.12 |ilv5||acetohydroxyacid
reductoisomerase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 25.8 bits (54), Expect = 7.2
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Frame = -1
Query: 650 APADKAKNEKVQEALQLLDKFLE--GQKYVAGPNLTVADLSLIA-SVSSLEASDIDFKK- 483
+PA+ A NE V+EA Q L + G Y+ T A I + LEA+ +
Sbjct: 291 SPAE-AFNETVEEATQSLYPLIGKYGLDYMFAACSTTARRGAIDWTPRFLEANKKVLNEL 349
Query: 482 YANVKRWYETVKS----TAPGYQEANEKGLEAFKGL 387
Y NV+ E +S +AP Y+E +K LE + L
Sbjct: 350 YDNVENGNEAKRSLEYNSAPNYRELYDKELEEIRNL 385
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 593 KFLEGQKYVAGPNLTVADLSLIASVSSLEASDI 495
+F Q+Y+ + DL ++A SLEA DI
Sbjct: 459 EFQSTQRYLVLSEIGETDLDILAEPKSLEACDI 491
>SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 316
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 612 SPSAAGQVPRRSEVRGRTEPHRRRPES 532
+PSAA +VP++ + + +P RR S
Sbjct: 115 TPSAASEVPKKKYKKIKVDPSARRTSS 141
>SPBC1778.04 |spo6||Spo4-Spo6 kinase complex regulatory subunit
Spo6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 381 IDKSLECLQSFLVGLLVTRSCTLNRLVPSLNVGVFLE 491
++ S CLQS L G V + + VPS NV F E
Sbjct: 216 VNTSASCLQSLLDGEKVYGTSDKDFYVPSKNVEYFRE 252
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,935,442
Number of Sequences: 5004
Number of extensions: 56728
Number of successful extensions: 186
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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