Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_J24
         (797 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66560-1|CAA91449.1|  214|Caenorhabditis elegans Hypothetical pr...    35   0.059
AC024200-13|AAF36004.1|  214|Caenorhabditis elegans Glutathione ...    31   0.72 
Z80217-4|CAB02290.1|  213|Caenorhabditis elegans Hypothetical pr...    31   0.96 
Z99279-2|CAD89758.1|  500|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z99279-1|CAB16496.4|  598|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z50859-1|CAA90726.1|  208|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U53344-4|AAA96225.2|  575|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U70857-3|AAN84873.1|  950|Caenorhabditis elegans Na/ca exchanger...    28   8.9  
U70857-2|AAM29660.1|  975|Caenorhabditis elegans Na/ca exchanger...    28   8.9  
U70857-1|AAM29661.1|  925|Caenorhabditis elegans Na/ca exchanger...    28   8.9  
AJ001181-1|CAA04574.1|  925|Caenorhabditis elegans sodium-calciu...    28   8.9  

>Z66560-1|CAA91449.1|  214|Caenorhabditis elegans Hypothetical
           protein D1053.1 protein.
          Length = 214

 Score = 35.1 bits (77), Expect = 0.059
 Identities = 20/54 (37%), Positives = 30/54 (55%)
 Frame = -1

Query: 611 ALQLLDKFLEGQKYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKRWYETV 450
           AL++L K   G KY  G ++T+ADLS+   + S    ++D   Y  V R  ET+
Sbjct: 141 ALEILLKQHSG-KYAVGDDVTIADLSIPPLIYSANRFNLDLSPYPTVNRINETL 193


>AC024200-13|AAF36004.1|  214|Caenorhabditis elegans Glutathione
           s-transferase protein43 protein.
          Length = 214

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = -1

Query: 629 NEKVQEALQLLDKFLEGQ--KYVAGPNLTVADLSLIASVSSLEASDIDFKKYANVKR 465
           N  V +    L++ L+    KY  G  LT+AD++L + + + +   +D  KY  + R
Sbjct: 132 NHFVNKGFLALEELLKKHSGKYCVGDQLTIADINLPSIIYNAKIYKVDMSKYPTITR 188


>Z80217-4|CAB02290.1|  213|Caenorhabditis elegans Hypothetical
           protein F37B1.4 protein.
          Length = 213

 Score = 31.1 bits (67), Expect = 0.96
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
 Frame = -1

Query: 602 LLDKFLEGQK--YVAGPNLTVADLSLIASVSSLE---ASDIDFKKYANVKRWYETVKST 441
           LL++ L+  K  Y+ G  LT ADL +  ++ SLE   A D D + + N+K++ E +  T
Sbjct: 140 LLNRILKKSKSGYLVGDGLTWADLVIADNLHSLEKLRAIDDDDEGHQNLKKYKEKIYGT 198


>Z99279-2|CAD89758.1|  500|Caenorhabditis elegans Hypothetical
           protein Y57G11A.1b protein.
          Length = 500

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -1

Query: 542 DLSLIASVSSLEASDIDFKKYANVK-RWYETVKSTAPGYQEANEKGLEAFKGLVN 381
           D ++I      E  +++F+   ++K +W E    TA   + A  K LEA KG V+
Sbjct: 78  DPNIIRGSKKAEKVELNFENVGDIKNKWKEGNVETAEAKEAAERKELEALKGGVS 132


>Z99279-1|CAB16496.4|  598|Caenorhabditis elegans Hypothetical
           protein Y57G11A.1a protein.
          Length = 598

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -1

Query: 542 DLSLIASVSSLEASDIDFKKYANVK-RWYETVKSTAPGYQEANEKGLEAFKGLVN 381
           D ++I      E  +++F+   ++K +W E    TA   + A  K LEA KG V+
Sbjct: 78  DPNIIRGSKKAEKVELNFENVGDIKNKWKEGNVETAEAKEAAERKELEALKGGVS 132


>Z50859-1|CAA90726.1|  208|Caenorhabditis elegans Hypothetical
           protein T26C5.1 protein.
          Length = 208

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 9/105 (8%)
 Frame = -1

Query: 797 YLVNKYXKGSSLYPEDPKARVLVDQRLYFDIGTLYQRFSDYFYPQVFAG---APADKAKN 627
           YL  K+        E       VDQ   F     Y    DY+Y  +  G      D+ K+
Sbjct: 70  YLAKKFGFAGKTAEESAMVDAFVDQFKDF-----YSEIRDYYYTMLGLGLTDLDGDEQKD 124

Query: 626 EKVQEA----LQLLDKFLEGQK--YVAGPNLTVADLSLIASVSSL 510
           + +  A    L LL ++LE  K  ++    LT ADL ++ +++SL
Sbjct: 125 KVLIPARDKFLPLLTRYLEKSKSGFLVDGGLTFADLIILDNMTSL 169


>U53344-4|AAA96225.2|  575|Caenorhabditis elegans Hypothetical
           protein T07H6.5 protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 614 PVPSRSWPCRLGHRRILGDRNNH*ISGTKFRCRN 715
           P+   +WP R+ H RIL  +++H  S  K+ C N
Sbjct: 375 PLSCHNWPPRVPHARILFSKSSH-GSIAKYECNN 407


>U70857-3|AAN84873.1|  950|Caenorhabditis elegans Na/ca exchangers
           protein 2, isoformd protein.
          Length = 950

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +3

Query: 486 LEVNVRGFQAGDTGDETQVG 545
           +EV  RGF+AGD G  T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154


>U70857-2|AAM29660.1|  975|Caenorhabditis elegans Na/ca exchangers
           protein 2, isoforma protein.
          Length = 975

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +3

Query: 486 LEVNVRGFQAGDTGDETQVG 545
           +EV  RGF+AGD G  T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154


>U70857-1|AAM29661.1|  925|Caenorhabditis elegans Na/ca exchangers
           protein 2, isoformb protein.
          Length = 925

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +3

Query: 486 LEVNVRGFQAGDTGDETQVG 545
           +EV  RGF+AGD G  T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154


>AJ001181-1|CAA04574.1|  925|Caenorhabditis elegans sodium-calcium
           exchanger protein.
          Length = 925

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +3

Query: 486 LEVNVRGFQAGDTGDETQVG 545
           +EV  RGF+AGD G  T VG
Sbjct: 135 IEVIARGFEAGDLGPNTIVG 154


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,088,250
Number of Sequences: 27780
Number of extensions: 315183
Number of successful extensions: 846
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)