Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_J22
         (682 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0387 - 2804990-2805059,2805106-2806086,2806856-2806875           30   2.0  
01_06_1762 - 39716723-39717016,39717256-39717332,39717452-397174...    29   2.6  
12_02_0960 - 24826918-24827373,24828357-24828471,24831110-248312...    29   4.5  
07_03_0502 + 18826595-18826660,18826815-18826885,18828963-188290...    28   7.9  
02_02_0693 + 13006243-13006245,13006439-13006501,13006608-130066...    28   7.9  

>02_01_0387 - 2804990-2805059,2805106-2806086,2806856-2806875
          Length = 356

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +1

Query: 466 VAANWWGSRIFCRSVKAGSPGNLTASIRKPCSAEDERCSRN 588
           V  NWW S IFC+S    S G   A  R+  S+     +R+
Sbjct: 246 VRGNWWTSCIFCKSFCRSSGGRSRARARERRSSGRRSSNRS 286


>01_06_1762 -
           39716723-39717016,39717256-39717332,39717452-39717498,
           39717953-39718053,39718271-39718360,39718556-39720133
          Length = 728

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = -3

Query: 377 DFFKSHEIVGSSIFIIYDDERVGAWLIDFAKTRKIPTGSQVNHRAPWQQGNHEEG 213
           DF +S+E+      +IY D + G +LI   K R+    +Q    +    G H+ G
Sbjct: 607 DFVRSNELQEGDFIVIYSDIKSGKYLIRGVKVRR---AAQEQGNSSGAVGKHKHG 658


>12_02_0960 -
           24826918-24827373,24828357-24828471,24831110-24831236,
           24831517-24831559,24831964-24832022,24832850-24833141
          Length = 363

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -3

Query: 527 PGEPALTDLQKIREPHQLAATVARFLGNDERARREI 420
           PGE  L DLQ    PH LA++ +  L  ++R  +EI
Sbjct: 179 PGEQQLQDLQSGWPPHYLASSESDHLLMEQRLMQEI 214


>07_03_0502 +
           18826595-18826660,18826815-18826885,18828963-18829056,
           18829575-18831521
          Length = 725

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
 Frame = +3

Query: 306 SSNSFIIVNDEDAAANN--FVAFKEIRTFKMISDLSKTRGNLPSCSFIIPKETCHCSGQL 479
           S  +F++    D  + N   +  K  R    +SD    +G   S +   P  +C C   L
Sbjct: 658 SELAFLVKEVRDPLSGNREIIIRKIHRENNCVSDFLANKGGSESLTAFWPDNSCDCISHL 717

Query: 480 VGFANFL 500
           VG  +F+
Sbjct: 718 VGVDSFV 724


>02_02_0693 +
           13006243-13006245,13006439-13006501,13006608-13006687,
           13007964-13008072,13009027-13009074,13011044-13011203,
           13011295-13011458,13011549-13011902
          Length = 326

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +1

Query: 424 SLRARSSFPRKRATVAANWWGSRIFCRSVKAGSPGNLTASIRKPCS 561
           +++A S FP   ++ + N     +  R++KAG+   L AS  KP S
Sbjct: 261 AIKAASIFPESSSSTSKNKLDLALKRRNIKAGAASALMASRVKPSS 306


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,085,253
Number of Sequences: 37544
Number of extensions: 395350
Number of successful extensions: 1043
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)