Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_J22
         (682 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    24   5.1  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            23   6.7  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   6.7  

>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 10/27 (37%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
 Frame = -1

Query: 502 YRKFANPTNWPLQWH--VSLGMMNEHE 428
           Y  F   TN P+ W   + LG  + HE
Sbjct: 657 YSNFIGTTNMPMSWESSIDLGAYHLHE 683


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +3

Query: 348 ANNFVAFKEIRTFKMISDLSK 410
           ANN V +++ RT+  + +LSK
Sbjct: 25  ANNTVTYEQRRTWHFVPELSK 45


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 17/71 (23%), Positives = 33/71 (46%)
 Frame = -3

Query: 515  ALTDLQKIREPHQLAATVARFLGNDERARREIASRLREIRDHFERSDFFKSHEIVGSSIF 336
            ALTDL+     + + A++A   G   +    ++  L+E+ D F R      H I     +
Sbjct: 2047 ALTDLRSALVNNTIFASLAVRHGF-HKYFLHLSPGLQEVIDRFVRIQQENGHRITEEEYY 2105

Query: 335  IIYDDERVGAW 303
            +  +D+ +G +
Sbjct: 2106 LPDEDDELGEY 2116


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 726,353
Number of Sequences: 2352
Number of extensions: 15626
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)