Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_J22
         (682 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...   142   2e-36
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...   142   2e-36
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...   142   2e-36
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   4.7  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    21   8.2  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score =  142 bits (345), Expect = 2e-36
 Identities = 70/177 (39%), Positives = 103/177 (58%), Gaps = 1/177 (0%)
 Frame = -3

Query: 680 DLYEKMVRXDPNAPTESEHAARAVXKLRYMQFREQRSSSAEQGFRIEAVKLPGEPALTDL 501
           D+YEKMV+ DP AP   E   + V K RYM +RE  SS+A  GFR+E +KL    +  D 
Sbjct: 371 DMYEKMVQVDPTAPNAEERRVQGVTKPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDF 430

Query: 500 QKIREPHQLAATVARFLGNDERARREIASRLREIRDHFERSDFFKSHEIVGSSIFIIYDD 321
           +  R   Q+   + RF+     A  +   RL+ IR   + S FF SHE+VGSS+  ++D 
Sbjct: 431 KTTRTREQVTEALRRFVEGYPHAVPKYIQRLKAIRATLKASPFFASHEVVGSSLLFVHDT 490

Query: 320 ERVGAWLIDFAKTRKIPTG-SQVNHRAPWQQGNHEEGFLFGLDRLIQTIETAKLSPQ 153
           +  G W+IDFAKT  +P    +++H A W+ GNHE+G+L G++ LI   +  + S +
Sbjct: 491 KNAGIWMIDFAKTLPLPQHLPRIHHDAEWKVGNHEDGYLIGVNNLIDIFQDIRNSEE 547


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score =  142 bits (345), Expect = 2e-36
 Identities = 70/177 (39%), Positives = 103/177 (58%), Gaps = 1/177 (0%)
 Frame = -3

Query: 680 DLYEKMVRXDPNAPTESEHAARAVXKLRYMQFREQRSSSAEQGFRIEAVKLPGEPALTDL 501
           D+YEKMV+ DP AP   E   + V K RYM +RE  SS+A  GFR+E +KL    +  D 
Sbjct: 286 DMYEKMVQVDPTAPNAEERRVQGVTKPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDF 345

Query: 500 QKIREPHQLAATVARFLGNDERARREIASRLREIRDHFERSDFFKSHEIVGSSIFIIYDD 321
           +  R   Q+   + RF+     A  +   RL+ IR   + S FF SHE+VGSS+  ++D 
Sbjct: 346 KTTRTREQVTEALRRFVEGYPHAVPKYIQRLKAIRATLKASPFFASHEVVGSSLLFVHDT 405

Query: 320 ERVGAWLIDFAKTRKIPTG-SQVNHRAPWQQGNHEEGFLFGLDRLIQTIETAKLSPQ 153
           +  G W+IDFAKT  +P    +++H A W+ GNHE+G+L G++ LI   +  + S +
Sbjct: 406 KNAGIWMIDFAKTLPLPQHLPRIHHDAEWKVGNHEDGYLIGVNNLIDIFQDIRNSEE 462


>AF388659-1|AAK71995.1|  782|Apis mellifera
            1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score =  142 bits (345), Expect = 2e-36
 Identities = 70/177 (39%), Positives = 103/177 (58%), Gaps = 1/177 (0%)
 Frame = -3

Query: 680  DLYEKMVRXDPNAPTESEHAARAVXKLRYMQFREQRSSSAEQGFRIEAVKLPGEPALTDL 501
            D+YEKMV+ DP AP   E   + V K RYM +RE  SS+A  GFR+E +KL    +  D 
Sbjct: 605  DMYEKMVQVDPTAPNAEERRVQGVTKPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDF 664

Query: 500  QKIREPHQLAATVARFLGNDERARREIASRLREIRDHFERSDFFKSHEIVGSSIFIIYDD 321
            +  R   Q+   + RF+     A  +   RL+ IR   + S FF SHE+VGSS+  ++D 
Sbjct: 665  KTTRTREQVTEALRRFVEGYPHAVPKYIQRLKAIRATLKASPFFASHEVVGSSLLFVHDT 724

Query: 320  ERVGAWLIDFAKTRKIPTG-SQVNHRAPWQQGNHEEGFLFGLDRLIQTIETAKLSPQ 153
            +  G W+IDFAKT  +P    +++H A W+ GNHE+G+L G++ LI   +  + S +
Sbjct: 725  KNAGIWMIDFAKTLPLPQHLPRIHHDAEWKVGNHEDGYLIGVNNLIDIFQDIRNSEE 781


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -3

Query: 368 KSHEIVGSSIFIIYDDERVGAWLIDFAKTRKIPTGSQVN 252
           +SHE+  +++F++       + L   A+  K+ T  QVN
Sbjct: 695 ESHEVRCTAVFLLMKTNPPLSMLQRMAEFTKLDTNRQVN 733


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 421 ISLRARSSFPRKRATVAANWW 483
           ISL +R+  P+ R   A +W+
Sbjct: 290 ISLDSRTDLPKVRYATALDWF 310


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,143
Number of Sequences: 438
Number of extensions: 3686
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)