Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_J21
         (708 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           23   3.7  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           23   3.7  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   5.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   5.0  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   5.0  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   6.6  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   6.6  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   8.7  

>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 26  KNATMHILIMHGNQCN 73
           KN  + IL  HG QCN
Sbjct: 89  KNPKLGILGTHGRQCN 104


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 26  KNATMHILIMHGNQCN 73
           KN  + IL  HG QCN
Sbjct: 90  KNPKLGILGTHGRQCN 105


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = -1

Query: 597 GFGYKGSIFHRVIPN 553
           GFGY+ ++ ++V+P+
Sbjct: 389 GFGYESNVKYQVVPS 403


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = -1

Query: 597 GFGYKGSIFHRVIPN 553
           GFGY+ ++ ++V+P+
Sbjct: 389 GFGYESNVKYQVVPS 403


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = -1

Query: 597 GFGYKGSIFHRVIPN 553
           GFGY+ ++ ++V+P+
Sbjct: 15  GFGYESNVKYQVVPS 29


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 103 KYCY*CSELVIALIXMHDEDVHC 35
           +YC   +E + AL    DEDV C
Sbjct: 146 RYCLTPTERLEALCWTQDEDVIC 168


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +2

Query: 269 LEVFPDWLPKVSICLTTSMPSTTFPKTTCLPSSQ 370
           L V+P++   V +C   S   ++  KT C   +Q
Sbjct: 643 LNVYPEFQENVQLCSEISESYSSNNKTLCKCDAQ 676


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 103 KYCY*CSELVIALIXMHDEDVHC 35
           +YC   +E + AL    DED+ C
Sbjct: 199 RYCLTPTERLEALCWTQDEDIIC 221


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,827
Number of Sequences: 438
Number of extensions: 4137
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)