Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_J15
(759 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1827.03c |||acetyl-CoA ligase |Schizosaccharomyces pombe|chr... 102 5e-23
SPCC191.02c ||SPCC417.14c|acetyl-CoA ligase |Schizosaccharomyces... 76 5e-15
SPBC18H10.02 |lcf1||long-chain-fatty-acid-CoA ligase Lcf1 |Schiz... 57 2e-09
SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase |Schizosaccharo... 48 1e-06
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 35 0.011
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 35 0.011
SPBC25H2.16c |||adaptin|Schizosaccharomyces pombe|chr 2|||Manual 29 0.72
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.72
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 29 0.95
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 28 1.3
SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces ... 28 1.3
SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 28 1.7
SPCC191.06 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 28 1.7
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 27 2.2
SPBC1289.07c |rpc40|rpa42|DNA-directed RNA polymerase I and III ... 27 2.2
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.2
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 2.9
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 27 2.9
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.9
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 2.9
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 5.1
SPAC222.08c |||imidazoleglycerol-phosphate synthase |Schizosacch... 26 6.7
SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces p... 26 6.7
SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4 |Schizosacc... 26 6.7
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 25 8.9
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 25 8.9
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 25 8.9
SPAC664.14 |amt2||ammonium transporter Amt2|Schizosaccharomyces ... 25 8.9
>SPCC1827.03c |||acetyl-CoA ligase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 512
Score = 102 bits (245), Expect = 5e-23
Identities = 55/155 (35%), Positives = 92/155 (59%)
Frame = -2
Query: 536 KVLDIESGEKLGVEQEGELWIKTPLRMKGYMGDKAASDALFDGEGYVRTGDIGYYDKDGF 357
K+LD + G ++ +EGE+ ++ KGY+ + AA+ + F + + RTGD G DKDG+
Sbjct: 339 KILD-QKGNEMPQGKEGEICVRGINVTKGYLNNPAANKSSFTKDRFFRTGDEGKLDKDGY 397
Query: 356 FYIVDRLKELIKYKGFQVAPAELEALLLQHSGVADAGVVGLPDELAGELPIAFVVPQPNS 177
+I R+KEL+ G +++PAE++A+L+QH V++A +PDE G+ A + P
Sbjct: 398 VFITGRIKELVNRGGEKISPAEIDAVLMQHPDVSEAVCFAVPDEKYGQDIQAAINPVAGK 457
Query: 176 NVTEKELIEYVASKLSPAKHLRGGVIFINEIPKNA 72
VT K+L +Y+ K++ K + F + IPK A
Sbjct: 458 TVTPKQLHDYLEQKVAAFK-IPKKFYFTDRIPKTA 491
>SPCC191.02c ||SPCC417.14c|acetyl-CoA ligase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 662
Score = 76.2 bits (179), Expect = 5e-15
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 8/160 (5%)
Frame = -2
Query: 533 VLDIESGEKL-GVEQEGELWIKTPLRMKG---YMG-DKAASDALFDGEGYVRTGDIGYYD 369
++D +G+ + G + EG L I++P + G D+ L G+ TGD D
Sbjct: 456 IIDPLTGKIIEGNDVEGVLAIRSPWPSAARTVWRGHDRYIDTYLKPYPGFYFTGDGATRD 515
Query: 368 KDGFFYIVDRLKELIKYKGFQVAPAELEALLLQHSGVADAGVVGLPDELAGELPIAFVVP 189
KDG+ +I R+ +++ G +++ AE+EA LL H VA++ VVG+ DEL G+ AF++
Sbjct: 516 KDGYIWIRGRVDDVVNISGHRLSTAEIEAALLSHDAVAESAVVGVHDELTGQAVNAFILL 575
Query: 188 QPNSNVT---EKELIEYVASKLSPAKHLRGGVIFINEIPK 78
+P T EKELI V S + P R + +++PK
Sbjct: 576 KPGYEATVELEKELIMAVRSTIGPFASPR--KLIFSDLPK 613
Score = 27.5 bits (58), Expect = 2.2
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = +2
Query: 341 YRQYKKIHLCHSIQCRQS*RSLRHRTGRRSQLCRPCIPSCVTAS*SIIRLLAPHLISLHS 520
Y Y+++ L QC + +S+ G R + P IP + A +I+RL A H +
Sbjct: 117 YITYREL-LASVSQCAGALQSMGVGMGDRVAIYMPMIPETIIAMLAIVRLGAIHSVIFAG 175
Query: 521 LCLEPFGD 544
E D
Sbjct: 176 FSAESVAD 183
>SPBC18H10.02 |lcf1||long-chain-fatty-acid-CoA ligase Lcf1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 676
Score = 57.2 bits (132), Expect = 2e-09
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Frame = -2
Query: 536 KVLDIESGE--KLGVEQEGELWIKTPLRMKGYMGDKAASDALFDGEGYVRTGDIGYYDKD 363
K++D E G G GE+W++ P +GY+ + F +G+ RTGD+G +
Sbjct: 466 KLVDCEEGNYNSHGHPPRGEIWLRGPSLTRGYLNRDKENKESFTPDGWFRTGDVGELTPE 525
Query: 362 GFFYIVDRLKELIK-YKGFQVAPAELEALLLQHSGVADAGVVGLPDELAGELPIAFVVPQ 186
G I+DR K L+K G +A +LE+ S V++ V ++ P+A +V
Sbjct: 526 GLLRIIDRKKNLVKTQNGEYIALEKLESRYRTSSLVSNICVYADQTKVK---PLAIIV-- 580
Query: 185 PNSNVTEKELIEYVASKLSP 126
PN V K E LSP
Sbjct: 581 PNEPVVRKLATEQAG--LSP 598
>SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 48.4 bits (110), Expect = 1e-06
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = -2
Query: 488 GELWIKTPLRMKGYMGDKAASDALFDGEGYVRTGDIGYYDKDGFFYIVDRLKELIK-YKG 312
GE+WI+ P GY+ + A F +G+ +TGD+G K ++DR K ++K G
Sbjct: 491 GEVWIRGPAVCNGYLNRPEDNKAAFTEDGWFKTGDVGEIAKGNTLRLIDRKKNIVKSLNG 550
Query: 311 FQVAPAELEA 282
+A ++EA
Sbjct: 551 EYIALEKIEA 560
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 35.1 bits (77), Expect = 0.011
Identities = 30/126 (23%), Positives = 61/126 (48%)
Frame = +1
Query: 151 SISSFSVTFELGCGTTKAMGSSPASSSGRPTTPASATPLCCSNKASNSAGATWNPLYLIS 330
S SSFS T T+ + +S +SSS RP + +S + S+K+S+S+ ++ P+
Sbjct: 364 SSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSSSHSSSLSSHKSSSSSKSSSAPVSSAF 423
Query: 331 SFNLSTI*KNPSLS*YPMSPVLT*PSPSNRASLAALSPMYPFMRNGVLIHNSPSCSTPNF 510
N ++ + S + +S + + P + +S S + + R+ V + + S+ +
Sbjct: 424 YHNSTSSRSSSHSSSHSLSSLSSKPILTASSSSLLTSSSHTYERSTVYVVTVETVSSGSS 483
Query: 511 SPLSMS 528
+ S S
Sbjct: 484 TYASQS 489
Score = 33.9 bits (74), Expect = 0.025
Identities = 39/136 (28%), Positives = 65/136 (47%)
Frame = +1
Query: 124 AGDSFEATYSISSFSVTFELGCGTTKAMGSSPASSSGRPTTPASATPLCCSNKASNSAGA 303
A S ++ ISS S + T+ + SS +SSS PT+ +S + S+ +S+S +
Sbjct: 263 ASSSSSSSSIISSSSSSSSSPTSTSSTISSS-SSSSSSPTSTSST--ISSSSSSSSSFSS 319
Query: 304 TWNPLYLISSFNLSTI*KNPSLS*YPMSPVLT*PSPSNRASLAALSPMYPFMRNGVLIHN 483
T + + SS + S+ +P+ S +S + PS S+ +S + S + V +
Sbjct: 320 TLSSSSMSSSSSFSS---SPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSS 376
Query: 484 SPSCSTPNFSPLSMSR 531
S S ST S S SR
Sbjct: 377 STSSSTLTSSSSSSSR 392
Score = 30.7 bits (66), Expect = 0.24
Identities = 37/124 (29%), Positives = 58/124 (46%)
Frame = +1
Query: 151 SISSFSVTFELGCGTTKAMGSSPASSSGRPTTPASATPLCCSNKASNSAGATWNPLYLIS 330
S SSFS + T + SSP+SSS TT +S + S+ S+S+ + + L S
Sbjct: 328 SSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSST--LTS 385
Query: 331 SFNLSTI*KNPSLS*YPMSPVLT*PSPSNRASLAALSPMYPFMRNGVLIHNSPSCSTPNF 510
S + S+ + S S + S S S+++S A +S F N +S S+ +
Sbjct: 386 SSSSSS--RPASSSSHSSSLSSHKSSSSSKSSSAPVSS--AFYHNSTSSRSSSHSSSHSL 441
Query: 511 SPLS 522
S LS
Sbjct: 442 SSLS 445
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 35.1 bits (77), Expect = 0.011
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = -2
Query: 395 RTGDIGYYDKDGFFYIVDRLKELIKYKGFQVAPAELEALLLQHSGVADAGVVGLPDELAG 216
R+GD+G Y G R + IK +GF++ E+ L +H V + + D+
Sbjct: 722 RSGDLGRYLPTGNVECSGRADDQIKIRGFRIELGEINTHLSRHPNVRENITLVRRDKDEE 781
Query: 215 ELPIAFVVPQ 186
+A++VPQ
Sbjct: 782 PTLVAYIVPQ 791
>SPBC25H2.16c |||adaptin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 533
Score = 29.1 bits (62), Expect = 0.72
Identities = 24/89 (26%), Positives = 38/89 (42%)
Frame = +1
Query: 103 TPPLKCLAGDSFEATYSISSFSVTFELGCGTTKAMGSSPASSSGRPTTPASATPLCCSNK 282
T K + S A+ + S+ + +L G+ S PASSS PT+ + L S
Sbjct: 326 TESAKSNSKTSANASNTQSAMDLLIDLDIGSDAQSPSLPASSSQMPTSSFNMESLSQSLL 385
Query: 283 ASNSAGATWNPLYLISSFNLSTI*KNPSL 369
+ A A + L SFN +P++
Sbjct: 386 GTVEAPAEVGAISLTESFNSPVSNSSPNV 414
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 29.1 bits (62), Expect = 0.72
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 4/120 (3%)
Frame = +1
Query: 40 SSAHAAVFSLXAFFGISLINITPPLKCLAG--DSFEATYSISSFSVTFELGCGTTKAMGS 213
SSA++ + + +S +N T + S +T + S+ S TT S
Sbjct: 426 SSANSTTATSASSTPLSSVNSTTATSASSTPLSSVNSTTATSASSTPLTSVNSTTATSAS 485
Query: 214 SPASSSGRPT--TPASATPLCCSNKASNSAGATWNPLYLISSFNLSTI*KNPSLS*YPMS 387
S +S T T AS+TPL +N ++++ ++ P S+N S++ S+S P+S
Sbjct: 486 STPLTSVNSTSATSASSTPLTSANSTTSTSVSSTAP-----SYNTSSVLPTSSVSSTPLS 540
Score = 28.7 bits (61), Expect = 0.95
Identities = 22/79 (27%), Positives = 38/79 (48%)
Frame = +1
Query: 151 SISSFSVTFELGCGTTKAMGSSPASSSGRPTTPASATPLCCSNKASNSAGATWNPLYLIS 330
S SS +T T A + S + T AS+TPL +N ++++ ++ P
Sbjct: 353 SASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVSSTAP----- 407
Query: 331 SFNLSTI*KNPSLS*YPMS 387
S+N S++ S+S P+S
Sbjct: 408 SYNTSSVLPTSSVSSTPLS 426
Score = 28.3 bits (60), Expect = 1.3
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +1
Query: 130 DSFEATYSISSFSVTFELGCGTTKAMGSSPA--SSSGRPTTPASATPLCCSNKASNSAGA 303
+S AT S SS +T +T ++P+ +SS PT+ S+TPL +N ++ + A
Sbjct: 379 NSTSAT-SASSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSAN-STTATSA 436
Query: 304 TWNPLYLISSFNLSTI*KNP 363
+ PL ++S ++ P
Sbjct: 437 SSTPLSSVNSTTATSASSTP 456
Score = 28.3 bits (60), Expect = 1.3
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +1
Query: 130 DSFEATYSISSFSVTFELGCGTTKAMGSSPA--SSSGRPTTPASATPLCCSNKASNSAGA 303
+S AT S SS +T +T ++P+ +SS PT+ S+TPL +N ++ + A
Sbjct: 493 NSTSAT-SASSTPLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSAN-STTATSA 550
Query: 304 TWNPLYLISSFNLSTI*KNP 363
+ PL ++S ++ P
Sbjct: 551 SSTPLTSVNSTTATSASSTP 570
Score = 25.4 bits (53), Expect = 8.9
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 145 TYSISSFSVTFELGCGTTKAMGSSPASSSGRPTTPASATPLCCSNKASNSAGAT 306
T S+SS ++ T A + S + T AS+TP S S+++G+T
Sbjct: 531 TSSVSSTPLSSANSTTATSASSTPLTSVNSTTATSASSTPFGNSTITSSASGST 584
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 28.7 bits (61), Expect = 0.95
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 205 MGSSPASSSGRPTTPASATPLCCSNKASNSAGATWNPL 318
+G+SPAS + +P T ++A P S N A AT P+
Sbjct: 194 LGNSPASITSKPATTSAAQP--SSKVEENMAKATSQPI 229
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 9/62 (14%)
Frame = -2
Query: 533 VLDIESGEKLGVEQEGELWIKTPLRMKGYMGDKAASDAL---------FDGEGYVRTGDI 381
+++ ++ E V + GE+W+++ + D + F G GYVRTGD+
Sbjct: 1280 IVNPDTRELCRVGEYGEIWMRSSANAISFFQSTDPVDMMRFNATNSDGFLGNGYVRTGDL 1339
Query: 380 GY 375
G+
Sbjct: 1340 GF 1341
>SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2111
Score = 28.3 bits (60), Expect = 1.3
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -2
Query: 449 YMGDKAASDALFDGEGYV-RTGDIGYYDKDGFFYIVDRLKELIKYKGFQVAPAEL 288
Y G+ LF+ + YV R K+ +FYI +E I YKG Q+AP ++
Sbjct: 207 YDGEAEFDTDLFERQLYVLRKQSSHLIGKEKWFYICSLHRETIVYKG-QLAPVQV 260
>SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 497
Score = 27.9 bits (59), Expect = 1.7
Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 6/143 (4%)
Frame = +1
Query: 103 TPPLKCLAGDSFEATYSISSFSVTFELGCGTTKAMGSSPASSSGRPTTPASATPLCCSNK 282
T PL + + FEA + S + E G G G + S++G P+ AS + ++
Sbjct: 167 TGPLVANSTEEFEAWKRMMKAS-SGEAGAGNVITPGVT--STTGAPSGKASLSRAASNSS 223
Query: 283 ASNSAGATWNPLYLISSFNLSTI*KNPSLS*---YP---MSPVLT*PSPSNRASLAALSP 444
S AG + + L+ S + PS+S P SP LT S + A S
Sbjct: 224 TSARAGISVDSLFGKRSAAQAMATVVPSVSTPGGTPPRFASPALTVESMVHAAPSTTTSS 283
Query: 445 MYPFMRNGVLIHNSPSCSTPNFS 513
+ NG+ + STPN S
Sbjct: 284 RFSKFFNGLAGPETSKTSTPNMS 306
>SPCC191.06 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 138
Score = 27.9 bits (59), Expect = 1.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 705 FWXQFXIIRXT*PQLYLHWQFS*QNIHWY 619
++ QF ++R P ++L W+F IH Y
Sbjct: 22 YFTQFFVLRYASPSMHLDWRFPSLRIHSY 50
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.5 bits (58), Expect = 2.2
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +1
Query: 139 EATYSISSFSVTFELGCGTTKAMGSSPASSSGRPTTPASATPLCCSNKASNSAGAT 306
+ T S SS S T T+ + SSP+SSS TT S++ S+ +S+S+ ++
Sbjct: 124 QTTVSSSSVSST------TSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSS 173
Score = 27.1 bits (57), Expect = 2.9
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Frame = +1
Query: 121 LAGDSFEATYSISSFSVTFELGCGTTKAMGSSPASSSGRPTTPASATPLCCSNKASNSAG 300
++ S +T S SS S TT +SP+SSS ++ +S++ S+ +S+S+
Sbjct: 127 VSSSSVSSTTSSSSSSSPSSSSTTTT----TSPSSSSSSSSSSSSSSSSSSSSSSSSSSS 182
Query: 301 ATWNPLYLISSFNLSTI*KNPSLS*YPM-SPVLT*PSPSNRASLAALSPMYPFMRNGVL- 474
++ + SS + S+ + S S P+ S + S S+ +S ++ S P + +
Sbjct: 183 SSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFIT 242
Query: 475 -IHNSPSCSTPNFSPLSMS 528
+ +S ST +P S S
Sbjct: 243 TMSSSTFISTVTVTPSSSS 261
>SPBC1289.07c |rpc40|rpa42|DNA-directed RNA polymerase I and III
subunit Rpc40 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 27.5 bits (58), Expect = 2.2
Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Frame = -2
Query: 395 RTGDIGYYDKDGFFYIVDRLKELIKYK---GFQVAPAELEALLLQHSGVADAGVV-GLPD 228
R D+G D G+++ D + +L K+K + + E ++ + SG+ DA +
Sbjct: 17 RVTDVGSVDFPGYYFDEDNIWDLDKFKKNLKVSITSLDQETMVFEISGI-DASIANAFRR 75
Query: 227 ELAGELP---IAFVVPQPNSNVTEKELIEY 147
L E+P FV N+++ + E++ +
Sbjct: 76 ILIAEIPTLAFEFVYIINNTSIIQDEVLSH 105
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 27.5 bits (58), Expect = 2.2
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Frame = +1
Query: 94 INITPPLKCLAGDSFEATYSISSFSVTFELGCGTTKAMGSSPASSSGRPTTPA-SATPLC 270
I+ T + G ++Y I+S S T ++ + SSP+SSS + ++ + S++
Sbjct: 127 ISSTSIAPSMIGTRTSSSYFITSSSST---PSSSSSSSSSSPSSSSSKSSSSSKSSSSSS 183
Query: 271 CSNKASNSAGATWNPLYLISSFNLSTI--*KNPSLS*YPMSPVLT*PSPSNRASLAAL 438
S+K+S+S+ ++ SS + S+ + S S + S +T +P++ +S A+
Sbjct: 184 SSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSSSFITSTTPASSSSSGAI 241
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 27.1 bits (57), Expect = 2.9
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Frame = +1
Query: 4 NVTVCSFAXLTWSSAHAAVFSLXAFFGISLINITPP-----LKCLAGDSFEATYSISSFS 168
+V S + + SS+ A+ S + +S + T P + L S + + S SS S
Sbjct: 39 SVIPSSSSSMLSSSSATAISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSS-SSAS 97
Query: 169 VTFELGCGTTKAMGSSPASSSGRPTTPASATPLCCSNKASNSAGAT 306
+T T + +SP SSS +S++ L S+ +S + ++
Sbjct: 98 LTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVASSSSSGMSSSS 143
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 518 SLCLEPFGDSFLYFT*KWSGSTPHFMQRRQIIFKYQWMFC*ENCQ 652
SLCL+P+G+S + S +P + + I F Y ENC+
Sbjct: 765 SLCLQPYGESKDFEVFLLSSKSPD-VSSKAISFFYDVQLAYENCK 808
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 27.1 bits (57), Expect = 2.9
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = +1
Query: 19 SFAXLTWSSAHAAVFSLXAFFGISLINITPPLKCLAGDSFEATYSIS-SFSVTFELGCGT 195
S + L S+ ++S + S TP S ++ S S S+T +
Sbjct: 120 SDSTLAASTISGGIYSSTSASSTSSSTATPSSSSTTSSSSSSSSSTPISSSITSSISSSA 179
Query: 196 TKAMGSSPASSSGRPTTPASATPLCCSN 279
+ ++ SS ASSSG ++ + T SN
Sbjct: 180 SSSVSSSSASSSGSISSADAKTVSASSN 207
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.1 bits (57), Expect = 2.9
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Frame = +1
Query: 199 KAMGSSPASSSGRPTTPASATPLCCSNKAS--NSAGATWNPLYLI----SSFNLSTI 351
K +S SSS TPAS+T S+ +S +S+ +++ P I SSF LST+
Sbjct: 734 KTASTSSGSSSSSSYTPASSTSTTTSSVSSRQSSSSSSFTPSSAISTAKSSFVLSTL 790
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 26.2 bits (55), Expect = 5.1
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +1
Query: 160 SFSVTFELGCGTTKAMGSSPASSSGRPTTPASATPLCCSNKASNSAGATWNPLYLISSFN 339
S V+ G T PASS+ +T + + + S+ + + G+ P Y SSF
Sbjct: 173 STDVSVSTGTSTDIVTLPPPASSTSSFSTITNTSMIPSSSSFTTTTGS---PYYNTSSFL 229
Query: 340 LSTI*KNPSLS*YPMSP--VLT*PSPSNRASLAALSPMYP 453
S++ + SLS + P ++T S S ++LS P
Sbjct: 230 PSSVISSASLSSSSVLPTSIITSTSTPVTVSSSSLSSFTP 269
>SPAC222.08c |||imidazoleglycerol-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 76 FFGISLINITPPLKCLAGDSFEATYSISSFSVTF 177
+FG ++ T + FEAT + SFS TF
Sbjct: 133 YFGPQTMSFTTDITVTESMQFEATEPLHSFSATF 166
>SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -3
Query: 664 IVPPLAVFLAKHPLVLKYDLSSLHEVWCGAAPLSSEIQKAVTKRF 530
+V +A A P +K + + +VWC S EI ++ +RF
Sbjct: 85 VVNSVADAYASVPASIKTKIKYVFDVWCQRGIFSKEILLSLQERF 129
>SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 488
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 224 LAGELPIAFVVPQPNSNVTEKELIEYVASKLS 129
++GE P V+ + + NV EK LIE V + S
Sbjct: 5 ISGETPKEPVISRVSGNVYEKRLIEQVIRETS 36
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +1
Query: 217 PASSSGRPTT-PASATPLCCSNKASNS 294
P SS+ P+T PASA+PL + K S +
Sbjct: 388 PNSSTSNPSTAPASASPLASTLKPSTA 414
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.4 bits (53), Expect = 8.9
Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Frame = -2
Query: 398 VRTGDIGYYDKDGFFYIVDRLK---------ELIKYKGFQVAPAELEALLLQHSGVADAG 246
V T D GY DKD F ++ +K ++ Y P + L+ + + A
Sbjct: 345 VDTQDRGYIDKDEFAVAMEIIKLRLSGKSLASILAYDDNPTEPTMQQNLVSDDTNASTAV 404
Query: 245 VVGLPDELAGELPIAFVVPQPNSNV 171
V ++ +P++ +PNS +
Sbjct: 405 PVAFTNDNVSNVPLSVADNEPNSTL 429
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -3
Query: 625 LVLKYDLSSLHEVWCGAAPLSSEIQKAVTK 536
L++KY+ S+ +W +P E+ K + K
Sbjct: 324 LLIKYNFISIDNIWAHLSPSDEELGKELGK 353
>SPAC664.14 |amt2||ammonium transporter Amt2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 512
Score = 25.4 bits (53), Expect = 8.9
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 353 YIVDRLKELIKYKGFQVAPAELEALLLQHSGVAD-AGVVGLPDEL 222
Y D ++E +YK ++++PA + ++ +GVA G V P ++
Sbjct: 455 YAFDYIEERREYKHWKISPAGVPEEIIISNGVAQPTGNVAAPGKI 499
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,091,836
Number of Sequences: 5004
Number of extensions: 65516
Number of successful extensions: 249
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 363302114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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