Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_J10
         (534 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118328-1|AAM48357.1|  249|Drosophila melanogaster LD21131p pro...    31   0.75 
AE013599-2424|AAM68496.1|  249|Drosophila melanogaster CG8938-PC...    31   0.75 
AE013599-2423|AAF57900.1|  249|Drosophila melanogaster CG8938-PB...    31   0.75 
AE013599-2422|AAF57901.1|  249|Drosophila melanogaster CG8938-PA...    31   0.75 

>AY118328-1|AAM48357.1|  249|Drosophila melanogaster LD21131p
           protein.
          Length = 249

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -3

Query: 253 PPKSSYTKFYENRLEPFPRSRLYIFIYKNCSFKDIRLVR 137
           P K SYT FY N ++       Y+F Y N  ++D+R+ R
Sbjct: 45  PIKHSYTLFYFN-VKALAEPLRYLFAYGNQEYEDVRVTR 82


>AE013599-2424|AAM68496.1|  249|Drosophila melanogaster CG8938-PC,
           isoform C protein.
          Length = 249

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -3

Query: 253 PPKSSYTKFYENRLEPFPRSRLYIFIYKNCSFKDIRLVR 137
           P K SYT FY N ++       Y+F Y N  ++D+R+ R
Sbjct: 45  PIKHSYTLFYFN-VKALAEPLRYLFAYGNQEYEDVRVTR 82


>AE013599-2423|AAF57900.1|  249|Drosophila melanogaster CG8938-PB,
           isoform B protein.
          Length = 249

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -3

Query: 253 PPKSSYTKFYENRLEPFPRSRLYIFIYKNCSFKDIRLVR 137
           P K SYT FY N ++       Y+F Y N  ++D+R+ R
Sbjct: 45  PIKHSYTLFYFN-VKALAEPLRYLFAYGNQEYEDVRVTR 82


>AE013599-2422|AAF57901.1|  249|Drosophila melanogaster CG8938-PA,
           isoform A protein.
          Length = 249

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -3

Query: 253 PPKSSYTKFYENRLEPFPRSRLYIFIYKNCSFKDIRLVR 137
           P K SYT FY N ++       Y+F Y N  ++D+R+ R
Sbjct: 45  PIKHSYTLFYFN-VKALAEPLRYLFAYGNQEYEDVRVTR 82


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,329,323
Number of Sequences: 53049
Number of extensions: 322954
Number of successful extensions: 605
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)