Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_J10
         (534 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81470-7|CAB03885.1|  129|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z49073-4|CAA88889.1| 1143|Caenorhabditis elegans Hypothetical pr...    27   6.4  
Z69637-4|CAA93469.1|  539|Caenorhabditis elegans Hypothetical pr...    27   8.5  

>Z81470-7|CAB03885.1|  129|Caenorhabditis elegans Hypothetical
           protein C14A6.8 protein.
          Length = 129

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +2

Query: 416 DNNIKATSADGVVKPPEANERL 481
           DN  K TS DGV K PE+N  L
Sbjct: 55  DNGAKVTSGDGVQKLPESNPSL 76


>Z49073-4|CAA88889.1| 1143|Caenorhabditis elegans Hypothetical
           protein ZK970.5 protein.
          Length = 1143

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = +3

Query: 240 EDFGGDKSDLATIYFKKML-FCSCFSIINFIDNQLYDSSR 356
           E +G D+  +A +YFK  L +CS  S++N ++  LY+ S+
Sbjct: 172 EIYGWDR--VALLYFKNELDYCS--SVVNDVEKSLYNESK 207


>Z69637-4|CAA93469.1|  539|Caenorhabditis elegans Hypothetical
           protein F35G2.4 protein.
          Length = 539

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 27  NHFSTFTRPXKRTVLFXLVVRRTGRGEL 110
           NH  T   P K   LF   +RR G G+L
Sbjct: 459 NHLGTAVFPSKNDALFWYNLRRDGEGDL 486


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,248,545
Number of Sequences: 27780
Number of extensions: 180319
Number of successful extensions: 378
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 378
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)