Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_J10
         (534 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.6  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.6  
M29491-1|AAA27726.1|   79|Apis mellifera protein ( Bee homeobox-...    21   7.9  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   7.9  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    21   7.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   7.9  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 465 KPMNVWFKVRPRK 503
           +PMNVWF  R R+
Sbjct: 588 EPMNVWFLSRERE 600


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 465 KPMNVWFKVRPRK 503
           +PMNVWF  R R+
Sbjct: 588 EPMNVWFLSRERE 600


>M29491-1|AAA27726.1|   79|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H17. ).
          Length = 79

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/32 (25%), Positives = 15/32 (46%)
 Frame = -1

Query: 264 PTYRPRNPLILNFMKIVWSRFRDPDYIYLYTR 169
           P  +PR P     +  +  +FR+  Y+ +  R
Sbjct: 8   PNRKPRTPFTTQQLLSLEKKFREKQYLTIAER 39


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 216 VWSRFRDPDYIYLY 175
           VW+RF   + +YLY
Sbjct: 127 VWARFNVNEQMYLY 140


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 331 IINFMTLLDIYWRI 372
           I++   LLD+ WRI
Sbjct: 283 ILHLFCLLDVQWRI 296


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 216 VWSRFRDPDYIYLY 175
           VW+RF   + +YLY
Sbjct: 127 VWARFNVNEQMYLY 140


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,394
Number of Sequences: 438
Number of extensions: 2072
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)