Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_J09
(418 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14969-1|AAA85657.1| 137|Homo sapiens ribosomal protein L28 pro... 102 6e-22
CR457024-1|CAG33305.1| 137|Homo sapiens RPL28 protein. 102 6e-22
BC011582-1|AAH11582.1| 137|Homo sapiens ribosomal protein L28 p... 102 6e-22
BC010182-1|AAH10182.1| 137|Homo sapiens ribosomal protein L28 p... 102 6e-22
BC010173-1|AAH10173.1| 137|Homo sapiens ribosomal protein L28 p... 102 6e-22
AB209627-1|BAD92864.1| 95|Homo sapiens ribosomal protein L28 v... 75 7e-14
Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein. 29 6.2
Y00387-1|CAA68457.1| 373|Homo sapiens glutamine synthetase prot... 29 6.2
X59834-1|CAA42495.1| 373|Homo sapiens glutamate--ammonia ligas... 29 6.2
X56958-1|CAA40279.2| 1872|Homo sapiens ankyrin (brank-2) protein. 29 6.2
S70290-1|AAB30693.1| 373|Homo sapiens glutamine synthetase prot... 29 6.2
BX537384-1|CAD97626.1| 373|Homo sapiens hypothetical protein pr... 29 6.2
BC127883-1|AAI27884.1| 258|Homo sapiens GLUL protein protein. 29 6.2
BC051726-1|AAH51726.1| 373|Homo sapiens GLUL protein protein. 29 6.2
BC031964-1|AAH31964.1| 373|Homo sapiens GLUL protein protein. 29 6.2
BC018992-1|AAH18992.1| 373|Homo sapiens glutamate-ammonia ligas... 29 6.2
BC011852-1|AAH11852.1| 373|Homo sapiens glutamate-ammonia ligas... 29 6.2
BC011700-1|AAH11700.1| 373|Homo sapiens glutamate-ammonia ligas... 29 6.2
BC010037-1|AAH10037.1| 373|Homo sapiens glutamate-ammonia ligas... 29 6.2
AY513283-1|AAT08036.1| 233|Homo sapiens proliferation-inducing ... 29 6.2
AY486123-1|AAS57905.1| 373|Homo sapiens glutamine synthetase pr... 29 6.2
AY486122-1|AAS57904.1| 373|Homo sapiens glutamine synthetase pr... 29 6.2
AL161952-1|CAB82304.1| 112|Homo sapiens hypothetical protein pr... 29 6.2
AL139344-1|CAI19842.1| 373|Homo sapiens glutamate-ammonia ligas... 29 6.2
>U14969-1|AAA85657.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 102 bits (244), Expect = 6e-22
Identities = 48/113 (42%), Positives = 70/113 (61%)
Frame = -3
Query: 341 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 162
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 161 GFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDXCKATL 3
G VV K+ RKPA + +R AR +L ++ +++ N YR D A +
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAI 111
>CR457024-1|CAG33305.1| 137|Homo sapiens RPL28 protein.
Length = 137
Score = 102 bits (244), Expect = 6e-22
Identities = 48/113 (42%), Positives = 70/113 (61%)
Frame = -3
Query: 341 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 162
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 161 GFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDXCKATL 3
G VV K+ RKPA + +R AR +L ++ +++ N YR D A +
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAI 111
>BC011582-1|AAH11582.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 102 bits (244), Expect = 6e-22
Identities = 48/113 (42%), Positives = 70/113 (61%)
Frame = -3
Query: 341 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 162
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 161 GFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDXCKATL 3
G VV K+ RKPA + +R AR +L ++ +++ N YR D A +
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAI 111
>BC010182-1|AAH10182.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 102 bits (244), Expect = 6e-22
Identities = 48/113 (42%), Positives = 70/113 (61%)
Frame = -3
Query: 341 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 162
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 161 GFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDXCKATL 3
G VV K+ RKPA + +R AR +L ++ +++ N YR D A +
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINRNARATLSSIRHMIRKNKYRPDLRMAAI 111
>BC010173-1|AAH10173.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 102 bits (244), Expect = 6e-22
Identities = 48/113 (42%), Positives = 70/113 (61%)
Frame = -3
Query: 341 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 162
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 161 GFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDXCKATL 3
G VV K+ RKPA + +R AR +L ++ +++ N YR D A +
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAI 111
>AB209627-1|BAD92864.1| 95|Homo sapiens ribosomal protein L28
variant protein.
Length = 95
Score = 75.4 bits (177), Expect = 7e-14
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = -3
Query: 341 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 162
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K
Sbjct: 9 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 66
Query: 161 GFTVVYKK 138
G VV K+
Sbjct: 67 GVVVVIKR 74
>Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein.
Length = 3925
Score = 29.1 bits (62), Expect = 6.2
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = -2
Query: 309 QQQCIPCEEAQYQKAVQQGAEQCD*PPLLQVQRLDSQESCWCRGEP*QEGIHSS 148
++ C + + ++AV + +E CD PP++ + + S + G P EG SS
Sbjct: 3684 EELCTAQHKQKEEQAVSKESETCDHPPIVSEEDISVGYSTFQDGVPKTEGDSSS 3737
>Y00387-1|CAA68457.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 308 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 213
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>X59834-1|CAA42495.1| 373|Homo sapiens glutamate--ammonia ligase
protein.
Length = 373
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 308 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 213
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>X56958-1|CAA40279.2| 1872|Homo sapiens ankyrin (brank-2) protein.
Length = 1872
Score = 29.1 bits (62), Expect = 6.2
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = -2
Query: 309 QQQCIPCEEAQYQKAVQQGAEQCD*PPLLQVQRLDSQESCWCRGEP*QEGIHSS 148
++ C + + ++AV + +E CD PP++ + + S + G P EG SS
Sbjct: 1599 EELCTAQHKQKEEQAVSKESETCDHPPIVSEEDISVGYSTFQDGVPKTEGDSSS 1652
>S70290-1|AAB30693.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 308 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 213
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BX537384-1|CAD97626.1| 373|Homo sapiens hypothetical protein
protein.
Length = 373
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 308 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 213
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC127883-1|AAI27884.1| 258|Homo sapiens GLUL protein protein.
Length = 258
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 308 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 213
N++ +LV + PF K+PN + F+YN
Sbjct: 44 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 75
>BC051726-1|AAH51726.1| 373|Homo sapiens GLUL protein protein.
Length = 373
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 308 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 213
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC031964-1|AAH31964.1| 373|Homo sapiens GLUL protein protein.
Length = 373
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 308 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 213
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC018992-1|AAH18992.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 308 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 213
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC011852-1|AAH11852.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 308 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 213
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC011700-1|AAH11700.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 308 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 213
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC010037-1|AAH10037.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 308 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 213
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AY513283-1|AAT08036.1| 233|Homo sapiens proliferation-inducing
protein 43 protein.
Length = 233
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 308 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 213
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AY486123-1|AAS57905.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 308 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 213
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AY486122-1|AAS57904.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 308 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 213
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AL161952-1|CAB82304.1| 112|Homo sapiens hypothetical protein
protein.
Length = 112
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 308 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 213
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AL139344-1|CAI19842.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 308 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 213
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,475,272
Number of Sequences: 237096
Number of extensions: 1206558
Number of successful extensions: 9187
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 9137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9181
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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