Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P09_pT_J03
(873 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpa... 196 2e-50
U41109-12|AAB37043.1| 451|Caenorhabditis elegans Hypothetical p... 166 2e-41
AF144639-1|AAD44756.1| 552|Caenorhabditis elegans sphingosine-1... 29 3.3
AF100673-6|AAC69001.1| 552|Caenorhabditis elegans Sphingosine p... 29 3.3
U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81549-1|CAB04466.1| 343|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr... 28 7.6
AF016449-10|AAG24001.2| 353|Caenorhabditis elegans Serpentine r... 28 7.6
>U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpase
protein 15 protein.
Length = 470
Score = 196 bits (477), Expect = 2e-50
Identities = 86/130 (66%), Positives = 108/130 (83%)
Frame = -3
Query: 865 SVQDXSSFDQYATEVKSGRLEWSPVHKSAKFWRENAARLNERGQELLRTLVHLLEKSRDP 686
SV D SS+D+Y +EV+SGRL+WSPVHKS KFWRENA++ N++ E+++ L+ LLE S DP
Sbjct: 332 SVHDLSSYDEYYSEVRSGRLQWSPVHKSEKFWRENASKFNDKQFEVVKILIKLLESSHDP 391
Query: 685 VVLAVACYDIGEYVRHYPRGKHIIEQLGGKQRVMYLLSHDDPNVRYEALLAVQKLMVHNW 506
++L VA +DIGEYVRHYPRGK ++EQ GK VM LL+ +DPNVRY ALLAVQKLMVHNW
Sbjct: 392 LILCVASHDIGEYVRHYPRGKTVVEQYQGKAAVMRLLTAEDPNVRYHALLAVQKLMVHNW 451
Query: 505 EYLGKQLEKE 476
EYLGKQL+ +
Sbjct: 452 EYLGKQLDSD 461
>U41109-12|AAB37043.1| 451|Caenorhabditis elegans Hypothetical
protein F52E1.10 protein.
Length = 451
Score = 166 bits (404), Expect = 2e-41
Identities = 76/126 (60%), Positives = 96/126 (76%)
Frame = -3
Query: 862 VQDXSSFDQYATEVKSGRLEWSPVHKSAKFWRENAARLNERGQELLRTLVHLLEKSRDPV 683
VQ +SFD+Y E++ G L WSP HK FW ENA RLN+ QELL+ LV +LEKS DP+
Sbjct: 326 VQVLTSFDEYENELRQGSLHWSPAHKCEVFWNENAHRLNDNRQELLKLLVAMLEKSNDPL 385
Query: 682 VLAVACYDIGEYVRHYPRGKHIIEQLGGKQRVMYLLSHDDPNVRYEALLAVQKLMVHNWE 503
VL VA +DIGE+VR+YPRGK +EQLGGK+ +M LL+ DPNVRY ALLA QKLM++NW+
Sbjct: 386 VLCVAAHDIGEFVRYYPRGKLKVEQLGGKEAMMRLLTVKDPNVRYHALLAAQKLMINNWK 445
Query: 502 YLGKQL 485
LG ++
Sbjct: 446 DLGLEI 451
>AF144639-1|AAD44756.1| 552|Caenorhabditis elegans
sphingosine-1-phosphate lyase protein.
Length = 552
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Frame = -3
Query: 718 LVHLLEKSRDPVVLAVACYDIGEYVRHYPRGKHIIEQ--LGGKQRVMYLLSHDDPNVRYE 545
+VHL KS DP++ + Y + +R P + IE+ K +++ + DD + ++
Sbjct: 48 VVHLYRKSEDPILKRMGAY-VFSLLRKLPAVRDKIEKELAAEKPKLIESIHKDDKDKQFI 106
Query: 544 ALLAVQKLMVHNWEYLGKQLEK-EQIDKQAGTVVGA 440
+ L + L + L K+ E + G V GA
Sbjct: 107 STLPIAPLSQDSIMELAKKYEDYNTFNIDGGRVSGA 142
>AF100673-6|AAC69001.1| 552|Caenorhabditis elegans Sphingosine
phosphate lyase protein1 protein.
Length = 552
Score = 29.5 bits (63), Expect = 3.3
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Frame = -3
Query: 718 LVHLLEKSRDPVVLAVACYDIGEYVRHYPRGKHIIEQ--LGGKQRVMYLLSHDDPNVRYE 545
+VHL KS DP++ + Y + +R P + IE+ K +++ + DD + ++
Sbjct: 48 VVHLYRKSEDPILKRMGAY-VFSLLRKLPAVRDKIEKELAAEKPKLIESIHKDDKDKQFI 106
Query: 544 ALLAVQKLMVHNWEYLGKQLEK-EQIDKQAGTVVGA 440
+ L + L + L K+ E + G V GA
Sbjct: 107 STLPIAPLSQDSIMELAKKYEDYNTFNIDGGRVSGA 142
>U46675-1|AAB52645.2| 524|Caenorhabditis elegans Hypothetical
protein F35A5.4 protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +3
Query: 414 VMSYKFYALAPTTVPACLSICSFSSCLPRYSQL*TISFCTASKASYRTFGSS*LRRYMTR 593
+ Y+ T VPAC+ CS S+C+ Q T S CT + S + + + + M R
Sbjct: 187 IQKYEITVEQETCVPACMPACS-SACV----QAVTCSTCTNNCPSICSQANC-IPQCMPR 240
Query: 594 CLP 602
CLP
Sbjct: 241 CLP 243
>Z81549-1|CAB04466.1| 343|Caenorhabditis elegans Hypothetical
protein F55C9.1 protein.
Length = 343
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = -1
Query: 228 IQKYDRI*LCILHV*KLCFNYDLINIIYCVNHKTVHPLVAIWP*FCSCQTTFLKV 64
I+ YD L L + CF LIN +YC+++ T + L +CS T L +
Sbjct: 147 IKHYDTSELFQLEEARRCFKNILINRVYCLSNSTSNVLQ-----YCSISTELLTI 196
>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
F36H2.3 protein.
Length = 1388
Score = 28.3 bits (60), Expect = 7.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 609 CSMMCLPRG*WRTYSPMS*QATASTTGS 692
CS + +P G TYSP S T+ T+G+
Sbjct: 1055 CSALTIPSGAQATYSPFSLSTTSFTSGT 1082
>AF016449-10|AAG24001.2| 353|Caenorhabditis elegans Serpentine
receptor, class t protein5 protein.
Length = 353
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/83 (22%), Positives = 42/83 (50%)
Frame = +2
Query: 494 AEIFPVVNHKFLHGEQGFVPYIRIVVTQEVHDTLFTTKLFDDVFAARIVAHIFSDVIASD 673
AE+ P FL G++ F+ I +++ ++ ++FT + +F+ +++F +I +
Sbjct: 136 AEVDPHFPLAFLFGKRIFIIVIFVLLCYGIYVSVFTQPI---IFSPEYASYLFDPLIGKN 192
Query: 674 GEYDRIAALLEQVHQGAKQFLTT 742
++ + +L VH LTT
Sbjct: 193 PDFYQNYTIL--VHNAVTCVLTT 213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,943,301
Number of Sequences: 27780
Number of extensions: 398495
Number of successful extensions: 943
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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