Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_J01
         (647 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113454-1|AAM29459.1|  297|Drosophila melanogaster RE35715p pro...   113   3e-25
AE014297-4433|AAN14186.1|  297|Drosophila melanogaster CG7610-PC...   113   3e-25
AE014297-4432|AAF56932.1|  297|Drosophila melanogaster CG7610-PB...   113   3e-25
AE014297-4431|AAN14185.1|  297|Drosophila melanogaster CG7610-PA...   113   3e-25
AY118558-1|AAM49927.1|  255|Drosophila melanogaster LD37258p pro...    29   5.4  
AY069357-1|AAL39502.1|  290|Drosophila melanogaster LD06138p pro...    29   5.4  
AE014297-3405|AAF56203.1|  255|Drosophila melanogaster CG13601-P...    29   5.4  
AE014134-1732|AAF52833.2|  309|Drosophila melanogaster CG31712-P...    29   5.4  

>AY113454-1|AAM29459.1|  297|Drosophila melanogaster RE35715p
           protein.
          Length = 297

 Score =  113 bits (271), Expect = 3e-25
 Identities = 56/58 (96%), Positives = 56/58 (96%)
 Frame = -1

Query: 647 YAXKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 474
           Y  KEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL
Sbjct: 239 YTMKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 296


>AE014297-4433|AAN14186.1|  297|Drosophila melanogaster CG7610-PC,
           isoform C protein.
          Length = 297

 Score =  113 bits (271), Expect = 3e-25
 Identities = 56/58 (96%), Positives = 56/58 (96%)
 Frame = -1

Query: 647 YAXKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 474
           Y  KEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL
Sbjct: 239 YTMKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 296


>AE014297-4432|AAF56932.1|  297|Drosophila melanogaster CG7610-PB,
           isoform B protein.
          Length = 297

 Score =  113 bits (271), Expect = 3e-25
 Identities = 56/58 (96%), Positives = 56/58 (96%)
 Frame = -1

Query: 647 YAXKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 474
           Y  KEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL
Sbjct: 239 YTMKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 296


>AE014297-4431|AAN14185.1|  297|Drosophila melanogaster CG7610-PA,
           isoform A protein.
          Length = 297

 Score =  113 bits (271), Expect = 3e-25
 Identities = 56/58 (96%), Positives = 56/58 (96%)
 Frame = -1

Query: 647 YAXKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 474
           Y  KEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL
Sbjct: 239 YTMKEGACSEQSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 296


>AY118558-1|AAM49927.1|  255|Drosophila melanogaster LD37258p
           protein.
          Length = 255

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 362 LIFFYDKSSRKVNKINDLQKNEKMQIVRSVNRI 460
           LIF Y + + K NK N+L ++EKM++   +  +
Sbjct: 98  LIFEYSRQTIKENKKNELAQSEKMELTNMLTEM 130


>AY069357-1|AAL39502.1|  290|Drosophila melanogaster LD06138p
           protein.
          Length = 290

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -3

Query: 606 HDRHGQRLKERRRDDRQADPHVQQD 532
           H RH +R ++R RD  ++D H ++D
Sbjct: 49  HGRHRERDRDRERDRHRSDRHTERD 73


>AE014297-3405|AAF56203.1|  255|Drosophila melanogaster CG13601-PA
           protein.
          Length = 255

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 362 LIFFYDKSSRKVNKINDLQKNEKMQIVRSVNRI 460
           LIF Y + + K NK N+L ++EKM++   +  +
Sbjct: 98  LIFEYSRQTIKENKKNELAQSEKMELTNMLTEM 130


>AE014134-1732|AAF52833.2|  309|Drosophila melanogaster CG31712-PA
           protein.
          Length = 309

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -3

Query: 606 HDRHGQRLKERRRDDRQADPHVQQD 532
           H RH +R ++R RD  ++D H ++D
Sbjct: 49  HGRHRERDRDRERDRHRSDRHTERD 73


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,025,543
Number of Sequences: 53049
Number of extensions: 496598
Number of successful extensions: 1536
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1536
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)