Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_J01
         (647 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.5  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   2.5  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   2.5  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    23   3.4  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    23   3.4  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    23   3.4  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    23   3.4  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   4.4  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   5.9  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   5.9  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 269 KYIFK*IKWTKVFR*HDSIKGLNRNVG 349
           ++IF  I + K+ + HD+ K LN+  G
Sbjct: 65  RWIFSCIGYYKLNKIHDAYKDLNQRYG 91


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 54  SLVSRECCRDGSCPVSAS 107
           +LV +E C+ G C V  S
Sbjct: 115 NLVGKEACKQGVCTVEVS 132


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 54  SLVSRECCRDGSCPVSAS 107
           +LV +E C+ G C V  S
Sbjct: 115 NLVGKEACKQGVCTVEVS 132


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +2

Query: 143 INMEMRVVVVPCYFGWYPHQLLITKVNEQSEL 238
           IN+E   V VP Y+G +P + +   ++ Q ++
Sbjct: 122 INIEQIPVPVPVYYGNFPPRPMGPWISMQEQI 153


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +2

Query: 143 INMEMRVVVVPCYFGWYPHQLLITKVNEQSEL 238
           IN+E   V VP Y+G +P + +   ++ Q ++
Sbjct: 122 INIEQIPVPVPVYYGNFPPRPMGPWISMQEQI 153


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +2

Query: 143 INMEMRVVVVPCYFGWYPHQLLITKVNEQSEL 238
           IN+E   V VP Y+G +P + +   ++ Q ++
Sbjct: 122 INIEQIPVPVPVYYGNFPPRPMGPWISMQEQI 153


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +2

Query: 143 INMEMRVVVVPCYFGWYPHQLLITKVNEQSEL 238
           IN+E   V VP Y+G +P + +   ++ Q ++
Sbjct: 347 INIEQIPVPVPVYYGNFPPRPMGPWISMQEQI 378


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +3

Query: 462 GGLVQGGRTRDDLDELPGDDS 524
           GG+ Q G+ +++ D+   D+S
Sbjct: 73  GGIQQAGKPKEETDDKDDDES 93


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -3

Query: 600 RHGQRLKERRRDDRQADPHVQQD 532
           RHG R+ + + +    DP++  D
Sbjct: 10  RHGDRIPDEKNEMYPKDPYLYYD 32


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -3

Query: 600 RHGQRLKERRRDDRQADPHVQQD 532
           RHG R+ + + +    DP++  D
Sbjct: 25  RHGDRIPDEKNEMYPKDPYLYYD 47


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,240
Number of Sequences: 438
Number of extensions: 3125
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)