Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_I22
         (778 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0251 + 19952882-19955459,19956209-19956245,19956370-199565...    31   0.77 
06_03_0609 + 22710442-22713502,22713596-22713948                       29   4.1  
07_01_0040 + 325737-328181                                             29   5.4  

>01_05_0251 + 19952882-19955459,19956209-19956245,19956370-19956586,
            19957063-19957221,19957397-19957516,19957609-19957719
          Length = 1073

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 17/55 (30%), Positives = 32/55 (58%)
 Frame = +2

Query: 8    LFLQLSSIAFFQISFAAPLAISNGMLFTSAIDNVPWY**IITMHLQLFDVYFLHY 172
            LF+   S+A     FA+PL+I N ++ T +++ +P+Y   +++ + L  V F  Y
Sbjct: 976  LFVGYLSVASLIFMFASPLSIINLVIRTKSVEYMPFY---LSLSMFLMSVSFFAY 1027


>06_03_0609 + 22710442-22713502,22713596-22713948
          Length = 1137

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = -1

Query: 520 DLSFNFTSLSISNDISNEVNERPLIL 443
           DLS+N+ S SIS+++ N VN   LI+
Sbjct: 615 DLSYNYLSGSISDEVGNLVNLNKLII 640


>07_01_0040 + 325737-328181
          Length = 814

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -2

Query: 342 VNYNISKCLLTCKLVACKLYIFSMFALIKKTSI 244
           V+++ + C+L C   AC +    +FAL+ KT+I
Sbjct: 333 VSHSSAGCVLRCVGTACLVIAILLFALLDKTAI 365


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,706,745
Number of Sequences: 37544
Number of extensions: 217382
Number of successful extensions: 342
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 342
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)