Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_I21
         (403 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0215 - 1634141-1634144,1634467-1634510,1635639-1635668,163...    28   3.2  
12_01_0750 - 6754126-6755248,6755331-6755791                           27   5.6  
02_05_0131 + 26098459-26098668,26098788-26098863,26101972-261021...    27   5.6  
02_05_0127 - 26053055-26053306,26055415-26055564,26055657-260557...    27   7.3  
11_06_0061 - 19702893-19703869,19703960-19704098,19704166-197042...    26   9.7  

>12_01_0215 -
           1634141-1634144,1634467-1634510,1635639-1635668,
           1635784-1635891,1635975-1636060,1636779-1636866,
           1638135-1638253,1638525-1638600,1638820-1638882,
           1639536-1639592,1640016-1640056,1640642-1640738,
           1641636-1641692
          Length = 289

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 17/62 (27%), Positives = 26/62 (41%)
 Frame = -3

Query: 380 DIRAAXETEDVIMKRFLANFESDGTVDGKVTLEEFMNYYSGISVSIDNDCYFDLMMRQAY 201
           D+  A   ED+    F A F S     G +       Y + + +      Y DL++R +Y
Sbjct: 68  DLHVAKRVEDI---GFYAGFVSTSWAIGLIVGPAISGYLAQVPIFSTLFMYIDLLLRYSY 124

Query: 200 KL 195
           KL
Sbjct: 125 KL 126


>12_01_0750 - 6754126-6755248,6755331-6755791
          Length = 527

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 15/61 (24%), Positives = 28/61 (45%)
 Frame = -3

Query: 380 DIRAAXETEDVIMKRFLANFESDGTVDGKVTLEEFMNYYSGISVSIDNDCYFDLMMRQAY 201
           D  A  +   V  +R+    + D  V+G+V +EE +  +S   V+   +    ++ R  Y
Sbjct: 418 DADADNDNATVDRRRYSVVIDPDDVVEGRVRIEEVLRRFSDDEVAAMREEVIRMIPRFVY 477

Query: 200 K 198
           K
Sbjct: 478 K 478


>02_05_0131 +
           26098459-26098668,26098788-26098863,26101972-26102178,
           26102311-26102435,26102740-26102900,26102977-26103067,
           26103161-26103310,26103396-26103632
          Length = 418

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
 Frame = +3

Query: 222 VKVAVVVNGDADATVVVHELFKSNLPI-------DCSIGLKIREEPFHYYIFSFXRR 371
           ++  +++N  AD+ V+  E+F   LPI       DC   LK + +P   Y F+   R
Sbjct: 262 IEPTLLLNPPADSDVMTEEVFGPILPIITVKKIEDCIAYLKSKPKPIAMYAFTNNER 318


>02_05_0127 -
           26053055-26053306,26055415-26055564,26055657-26055747,
           26055835-26055995,26056455-26056579,26056680-26056886,
           26056936-26056996
          Length = 348

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
 Frame = +3

Query: 222 VKVAVVVNGDADATVVVHELFKSNLPI-------DCSIGLKIREEPFHYYIFS 359
           ++  +V+N   D+ +++ E+F   LPI       DC   LK + +P   Y F+
Sbjct: 187 IEPTIVLNPPFDSDIMMEEIFGPLLPIITVKKTEDCIAFLKSKPKPLAIYAFT 239


>11_06_0061 -
           19702893-19703869,19703960-19704098,19704166-19704287,
           19704362-19704416,19704508-19704624,19704718-19705413,
           19706358-19706393,19707190-19708236
          Length = 1062

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 243 NGDADATVVVHELFKSNLPIDCSIGLKI 326
           N   +   + H + KS LP+DCS+G ++
Sbjct: 781 NVATEVAEISHLMEKSMLPLDCSVGHEV 808


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,104,438
Number of Sequences: 37544
Number of extensions: 155611
Number of successful extensions: 327
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 327
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 694697784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)