Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_I20
         (468 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0404 + 3093851-3094051,3094622-3094948,3096685-3096798,309...    30   1.1  
07_01_0400 + 3048607-3048807,3049378-3049704,3051441-3051554,305...    30   1.1  
07_01_0396 + 3016900-3017175,3017926-3018039,3018138-3018350,301...    30   1.1  
11_03_0060 - 9406273-9407142                                           28   4.3  
02_01_0408 - 2972240-2975380                                           28   4.3  
01_05_0656 + 24011784-24011844,24012737-24012862,24014761-24016052     27   5.7  
11_04_0118 + 13624086-13625120                                         27   7.5  

>07_01_0404 +
           3093851-3094051,3094622-3094948,3096685-3096798,
           3096897-3097109,3097975-3098151,3098270-3100091,
           3100107-3100927,3101070-3101390
          Length = 1331

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -1

Query: 303 LDCKNRTVSLELL-PLHSCNNCGSSRWEKAPMLREKKITTLSDGLSXQG*RRN 148
           +  KN   +L+L   L   NN GSS W +   L   ++ + S+ L  QG R N
Sbjct: 810 MSTKNEMSNLDLTYGLQMGNNIGSSAWSQGMQLPSTQLQSSSNSLLDQGARLN 862


>07_01_0400 +
           3048607-3048807,3049378-3049704,3051441-3051554,
           3051653-3051865,3052731-3052907,3053026-3054847,
           3054863-3055683,3055826-3056146
          Length = 1331

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -1

Query: 303 LDCKNRTVSLELL-PLHSCNNCGSSRWEKAPMLREKKITTLSDGLSXQG*RRN 148
           +  KN   +L+L   L   NN GSS W +   L   ++ + S+ L  QG R N
Sbjct: 810 MSTKNEMSNLDLTYGLQMGNNIGSSAWSQGMQLPSTQLQSSSNSLLDQGARLN 862


>07_01_0396 +
           3016900-3017175,3017926-3018039,3018138-3018350,
           3019216-3019392,3019511-3021332,3021348-3022168,
           3022311-3022631
          Length = 1247

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = -1

Query: 303 LDCKNRTVSLELL-PLHSCNNCGSSRWEKAPMLREKKITTLSDGLSXQG*RRN 148
           +  KN   +L+L   L   NN GSS W +   L   ++ + S+ L  QG R N
Sbjct: 726 MSTKNEMSNLDLTYGLQMGNNIGSSAWSQGMQLPSTQLQSSSNSLLDQGARLN 778


>11_03_0060 - 9406273-9407142
          Length = 289

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 72  NLAFMLAVWYQ*IYIFASSNLSTQKCFFFTPXWI 173
           +L FML  WY   Y   +  ++T  CF   P W+
Sbjct: 193 SLDFMLDSWYHPPYPLYNFQMTTYYCFPIIPEWM 226


>02_01_0408 - 2972240-2975380
          Length = 1046

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -1

Query: 453  EEKMLSTYKLPCKAVRCAKCKYTAFSAAQRCKD 355
            EE+ML   ++ CK V C  C     +    C D
Sbjct: 1009 EEQMLKVLEVACKCVNCNPCMRPTITEVVSCLD 1041


>01_05_0656 + 24011784-24011844,24012737-24012862,24014761-24016052
          Length = 492

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = -1

Query: 321 KRFFKCLDCKNRTVS-LELLPLHSCNNCGSSRWEKAPMLREKKITT 187
           K FF CL     +   L L    S    G+SR+   PMLR KK+ T
Sbjct: 301 KSFFYCLPATPASSGFLTLGAPASGGGGGASRFATTPMLRSKKVPT 346


>11_04_0118 + 13624086-13625120
          Length = 344

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -1

Query: 426 LPCKAVRCAKCK-YTAFSAAQRCKDERHPLKVL 331
           LPC AV+C+ CK  T F +A   K   H L  L
Sbjct: 13  LPCLAVQCSCCKPNTTFISAAEKKPVAHGLPEL 45


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,502,159
Number of Sequences: 37544
Number of extensions: 190819
Number of successful extensions: 485
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 943260316
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)