SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P09_pT_I20
         (468 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC101727-1|AAI01728.1|  875|Homo sapiens minichromosome maintena...    91   2e-18
BC009108-1|AAH09108.1|  353|Homo sapiens Unknown (protein for IM...    91   2e-18
BC004876-1|AAH04876.2|  556|Homo sapiens MCM10 protein protein.        91   2e-18
AL355355-14|CAI16558.1|  874|Homo sapiens MCM10 minichromosome m...    91   2e-18
AL138764-8|CAI12913.1|  874|Homo sapiens MCM10 minichromosome ma...    91   2e-18
AB042719-1|BAB18723.1|  874|Homo sapiens MCM10 homolog protein.        91   2e-18
AL355355-13|CAI16557.1|  855|Homo sapiens MCM10 minichromosome m...    87   3e-17
AL138764-7|CAI12912.1|  855|Homo sapiens MCM10 minichromosome ma...    87   3e-17
BC014161-1|AAH14161.1|  402|Homo sapiens zinc finger protein 485...    32   0.86 
AL645634-2|CAH73487.1|  402|Homo sapiens zinc finger protein 485...    32   0.86 
AK074679-1|BAC11133.1|  441|Homo sapiens protein ( Homo sapiens ...    32   0.86 
AB107355-1|BAC67660.1|  738|Homo sapiens KIAA2033 protein protein.     31   2.6  
X68686-1|CAA48645.1|  223|Homo sapiens ZNF11A protein.                 29   6.1  
X68685-1|CAA48644.1|  223|Homo sapiens ZNF11B protein.                 29   6.1  
X68684-1|CAA48643.1|  379|Homo sapiens ZNF11B protein.                 29   6.1  
D31763-1|BAA06541.1|  848|Homo sapiens KIAA0065 protein.               29   6.1  
BC126119-1|AAI26120.1|  811|Homo sapiens ZNF33A protein protein.       29   6.1  
BC107726-1|AAI07727.1|  606|Homo sapiens ZNF33B protein protein.       29   6.1  
BC048313-1|AAH48313.1|  584|Homo sapiens ZNF33B protein protein.       29   6.1  
AY184389-1|AAO24702.1|  810|Homo sapiens zinc finger ZAK-associa...    29   6.1  
AL161931-1|CAH69953.1|  810|Homo sapiens zinc finger protein 33A...    29   6.1  
AL117337-4|CAH73315.1|  810|Homo sapiens zinc finger protein 33A...    29   6.1  
AL022345-3|CAI23623.1|  778|Homo sapiens zinc finger protein 33B...    29   6.1  
AJ491697-1|CAD36956.1|  778|Homo sapiens zinc finger protein 33b...    29   6.1  
BC115704-1|AAI15705.1|  394|Homo sapiens ZNF578 protein protein.       29   8.0  
BC103904-1|AAI03905.2|  365|Homo sapiens zinc finger protein 578...    29   8.0  
AK095562-1|BAC04574.1|  212|Homo sapiens protein ( Homo sapiens ...    29   8.0  
AK055946-1|BAB71051.1|  365|Homo sapiens protein ( Homo sapiens ...    29   8.0  
AF226869-1|AAF43389.1|  714|Homo sapiens RB-associated KRAB repr...    29   8.0  
AC092032-1|AAQ93364.1|  714|Homo sapiens unknown protein.              29   8.0  

>BC101727-1|AAI01728.1|  875|Homo sapiens minichromosome maintenance
            complex component 10 protein.
          Length = 875

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 41/90 (45%), Positives = 55/90 (61%)
 Frame = -1

Query: 468  KREAMEEKMLSTYKLPCKAVRCAKCKYTAFSAAQRCKDERHPLKVLDTFKRFFKCLDCKN 289
            K+E MEEKM +  ++ C+ V C  C YT F   + C  E+H     D  KRFFKC  C N
Sbjct: 762  KKEQMEEKMRNIREVKCRVVTCKTCAYTHFKLLETCVSEQHEYHWHDGVKRFFKC-PCGN 820

Query: 288  RTVSLELLPLHSCNNCGSSRWEKAPMLREK 199
            R++SL+ LP   C+NCG  +WE+  ML+EK
Sbjct: 821  RSISLDRLPNKHCSNCGLYKWERDGMLKEK 850


>BC009108-1|AAH09108.1|  353|Homo sapiens Unknown (protein for
           IMAGE:3451214) protein.
          Length = 353

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 41/90 (45%), Positives = 55/90 (61%)
 Frame = -1

Query: 468 KREAMEEKMLSTYKLPCKAVRCAKCKYTAFSAAQRCKDERHPLKVLDTFKRFFKCLDCKN 289
           K+E MEEKM +  ++ C+ V C  C YT F   + C  E+H     D  KRFFKC  C N
Sbjct: 240 KKEQMEEKMRNIREVKCRVVTCKTCAYTHFKLLETCVSEQHEYHWHDGVKRFFKC-PCGN 298

Query: 288 RTVSLELLPLHSCNNCGSSRWEKAPMLREK 199
           R++SL+ LP   C+NCG  +WE+  ML+EK
Sbjct: 299 RSISLDRLPNKHCSNCGLYKWERDGMLKEK 328


>BC004876-1|AAH04876.2|  556|Homo sapiens MCM10 protein protein.
          Length = 556

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 41/90 (45%), Positives = 55/90 (61%)
 Frame = -1

Query: 468 KREAMEEKMLSTYKLPCKAVRCAKCKYTAFSAAQRCKDERHPLKVLDTFKRFFKCLDCKN 289
           K+E MEEKM +  ++ C+ V C  C YT F   + C  E+H     D  KRFFKC  C N
Sbjct: 443 KKEQMEEKMRNIREVKCRVVTCKTCAYTHFKLLETCVSEQHEYHWHDGVKRFFKC-PCGN 501

Query: 288 RTVSLELLPLHSCNNCGSSRWEKAPMLREK 199
           R++SL+ LP   C+NCG  +WE+  ML+EK
Sbjct: 502 RSISLDRLPNKHCSNCGLYKWERDGMLKEK 531


>AL355355-14|CAI16558.1|  874|Homo sapiens MCM10 minichromosome
            maintenance deficient 10 (S., yeast) protein.
          Length = 874

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 41/90 (45%), Positives = 55/90 (61%)
 Frame = -1

Query: 468  KREAMEEKMLSTYKLPCKAVRCAKCKYTAFSAAQRCKDERHPLKVLDTFKRFFKCLDCKN 289
            K+E MEEKM +  ++ C+ V C  C YT F   + C  E+H     D  KRFFKC  C N
Sbjct: 761  KKEQMEEKMRNIREVKCRVVTCKTCAYTHFKLLETCVSEQHEYHWHDGVKRFFKC-PCGN 819

Query: 288  RTVSLELLPLHSCNNCGSSRWEKAPMLREK 199
            R++SL+ LP   C+NCG  +WE+  ML+EK
Sbjct: 820  RSISLDRLPNKHCSNCGLYKWERDGMLKEK 849


>AL138764-8|CAI12913.1|  874|Homo sapiens MCM10 minichromosome
            maintenance deficient 10 (S.nt regulator of chromatin,
            sub protein.
          Length = 874

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 41/90 (45%), Positives = 55/90 (61%)
 Frame = -1

Query: 468  KREAMEEKMLSTYKLPCKAVRCAKCKYTAFSAAQRCKDERHPLKVLDTFKRFFKCLDCKN 289
            K+E MEEKM +  ++ C+ V C  C YT F   + C  E+H     D  KRFFKC  C N
Sbjct: 761  KKEQMEEKMRNIREVKCRVVTCKTCAYTHFKLLETCVSEQHEYHWHDGVKRFFKC-PCGN 819

Query: 288  RTVSLELLPLHSCNNCGSSRWEKAPMLREK 199
            R++SL+ LP   C+NCG  +WE+  ML+EK
Sbjct: 820  RSISLDRLPNKHCSNCGLYKWERDGMLKEK 849


>AB042719-1|BAB18723.1|  874|Homo sapiens MCM10 homolog protein.
          Length = 874

 Score = 91.1 bits (216), Expect = 2e-18
 Identities = 41/90 (45%), Positives = 55/90 (61%)
 Frame = -1

Query: 468  KREAMEEKMLSTYKLPCKAVRCAKCKYTAFSAAQRCKDERHPLKVLDTFKRFFKCLDCKN 289
            K+E MEEKM +  ++ C+ V C  C YT F   + C  E+H     D  KRFFKC  C N
Sbjct: 761  KKEQMEEKMRNIREVKCRVVTCKTCAYTHFKLLETCVSEQHEYHWHDGVKRFFKC-PCGN 819

Query: 288  RTVSLELLPLHSCNNCGSSRWEKAPMLREK 199
            R++SL+ LP   C+NCG  +WE+  ML+EK
Sbjct: 820  RSISLDRLPNKHCSNCGLYKWERDGMLKEK 849


>AL355355-13|CAI16557.1|  855|Homo sapiens MCM10 minichromosome
            maintenance deficient 10 (S.din G/H synthase and
            cyclooxyg protein.
          Length = 855

 Score = 87.0 bits (206), Expect = 3e-17
 Identities = 39/88 (44%), Positives = 53/88 (60%)
 Frame = -1

Query: 468  KREAMEEKMLSTYKLPCKAVRCAKCKYTAFSAAQRCKDERHPLKVLDTFKRFFKCLDCKN 289
            K+E MEEKM +  ++ C+ V C  C YT F   + C  E+H     D  KRFFKC  C N
Sbjct: 761  KKEQMEEKMRNIREVKCRVVTCKTCAYTHFKLLETCVSEQHEYHWHDGVKRFFKC-PCGN 819

Query: 288  RTVSLELLPLHSCNNCGSSRWEKAPMLR 205
            R++SL+ LP   C+NCG  +WE+  ML+
Sbjct: 820  RSISLDRLPNKHCSNCGLYKWERDGMLK 847


>AL138764-7|CAI12912.1|  855|Homo sapiens MCM10 minichromosome
            maintenance deficient 10 (S.nt regulator of chromatin,
            sub protein.
          Length = 855

 Score = 87.0 bits (206), Expect = 3e-17
 Identities = 39/88 (44%), Positives = 53/88 (60%)
 Frame = -1

Query: 468  KREAMEEKMLSTYKLPCKAVRCAKCKYTAFSAAQRCKDERHPLKVLDTFKRFFKCLDCKN 289
            K+E MEEKM +  ++ C+ V C  C YT F   + C  E+H     D  KRFFKC  C N
Sbjct: 761  KKEQMEEKMRNIREVKCRVVTCKTCAYTHFKLLETCVSEQHEYHWHDGVKRFFKC-PCGN 819

Query: 288  RTVSLELLPLHSCNNCGSSRWEKAPMLR 205
            R++SL+ LP   C+NCG  +WE+  ML+
Sbjct: 820  RSISLDRLPNKHCSNCGLYKWERDGMLK 847


>BC014161-1|AAH14161.1|  402|Homo sapiens zinc finger protein 485
           protein.
          Length = 402

 Score = 32.3 bits (70), Expect = 0.86
 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
 Frame = -1

Query: 429 KLPCKAVRCAKC--KYTAFSAAQRCKDERHPLKVLDTFKRFFK-CLDCKNRTVSLELLPL 259
           K P + + C K   K++ F   QR      P K ++  K F K  +   ++ +     P 
Sbjct: 144 KQPYRCIECGKFLKKHSTFINHQRIHSREKPHKCIECGKTFRKNSILLSHQRIHTGQKP- 202

Query: 258 HSCNNCGSSRWEKAPMLREKKI 193
           + CN+CG +  + A + R ++I
Sbjct: 203 YKCNDCGKAFAQNAALTRHERI 224


>AL645634-2|CAH73487.1|  402|Homo sapiens zinc finger protein 485
           protein.
          Length = 402

 Score = 32.3 bits (70), Expect = 0.86
 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
 Frame = -1

Query: 429 KLPCKAVRCAKC--KYTAFSAAQRCKDERHPLKVLDTFKRFFK-CLDCKNRTVSLELLPL 259
           K P + + C K   K++ F   QR      P K ++  K F K  +   ++ +     P 
Sbjct: 144 KQPYRCIECGKFLKKHSTFINHQRIHSREKPHKCIECGKTFRKNSILLSHQRIHTGQKP- 202

Query: 258 HSCNNCGSSRWEKAPMLREKKI 193
           + CN+CG +  + A + R ++I
Sbjct: 203 YKCNDCGKAFAQNAALTRHERI 224


>AK074679-1|BAC11133.1|  441|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90198 fis, clone MAMMA1001532, moderately
           similar to ZINC FINGER PROTEIN 84. ).
          Length = 441

 Score = 32.3 bits (70), Expect = 0.86
 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
 Frame = -1

Query: 429 KLPCKAVRCAKC--KYTAFSAAQRCKDERHPLKVLDTFKRFFK-CLDCKNRTVSLELLPL 259
           K P + + C K   K++ F   QR      P K ++  K F K  +   ++ +     P 
Sbjct: 183 KQPYRCIECGKFLKKHSTFINHQRIHSREKPHKCIECGKTFRKNSILLSHQRIHTGQKP- 241

Query: 258 HSCNNCGSSRWEKAPMLREKKI 193
           + CN+CG +  + A + R ++I
Sbjct: 242 YKCNDCGKAFAQNAALTRHERI 263


>AB107355-1|BAC67660.1|  738|Homo sapiens KIAA2033 protein protein.
          Length = 738

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
 Frame = -1

Query: 468 KREAMEEKMLSTYKLPCKAVRCAKC--KYTAFSAAQRCKDERHPLKVLDTFKRF-FKCLD 298
           KR     +   T + P K   C K   + ++ +  +R      P K  +  K F FK + 
Sbjct: 274 KRNLACHRRCHTGENPYKCNECGKTFSQTSSLTCHRRLHTGEKPYKCEECDKAFHFKSIL 333

Query: 297 CKNRTVSLELLPLHSCNNCGSSRWEKAPMLREKKITT 187
            ++R +  E  P + CN CG +  +K+ + R  ++ T
Sbjct: 334 ERHRIIHTEEKP-YKCNECGKTFRQKSILTRHHRLHT 369


>X68686-1|CAA48645.1|  223|Homo sapiens ZNF11A protein.
          Length = 223

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 252 CNNCGSSRWEKAPMLREKKITT 187
           CN CG + WEK+ + R +++ T
Sbjct: 192 CNECGKAFWEKSHLTRHQRVHT 213


>X68685-1|CAA48644.1|  223|Homo sapiens ZNF11B protein.
          Length = 223

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 252 CNNCGSSRWEKAPMLREKKITT 187
           CN CG + WEK+ + R +++ T
Sbjct: 192 CNECGKAFWEKSHLTRHQRVHT 213


>X68684-1|CAA48643.1|  379|Homo sapiens ZNF11B protein.
          Length = 379

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 252 CNNCGSSRWEKAPMLREKKITT 187
           CN CG + WEK+ + R +++ T
Sbjct: 256 CNECGKAFWEKSHLTRHQRVHT 277


>D31763-1|BAA06541.1|  848|Homo sapiens KIAA0065 protein.
          Length = 848

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 252 CNNCGSSRWEKAPMLREKKITT 187
           CN CG + WEK+ + R +++ T
Sbjct: 368 CNECGKAFWEKSHLTRHQRVHT 389


>BC126119-1|AAI26120.1|  811|Homo sapiens ZNF33A protein protein.
          Length = 811

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 252 CNNCGSSRWEKAPMLREKKITT 187
           CN CG + WEK+ + R +++ T
Sbjct: 331 CNECGKAFWEKSHLTRHQRVHT 352


>BC107726-1|AAI07727.1|  606|Homo sapiens ZNF33B protein protein.
          Length = 606

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 252 CNNCGSSRWEKAPMLREKKITT 187
           CN CG + WEK+ + R +++ T
Sbjct: 331 CNECGKAFWEKSHLTRHQRVHT 352


>BC048313-1|AAH48313.1|  584|Homo sapiens ZNF33B protein protein.
          Length = 584

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 252 CNNCGSSRWEKAPMLREKKITT 187
           CN CG + WEK+ + R +++ T
Sbjct: 331 CNECGKAFWEKSHLTRHQRVHT 352


>AY184389-1|AAO24702.1|  810|Homo sapiens zinc finger ZAK-associated
           protein protein.
          Length = 810

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 252 CNNCGSSRWEKAPMLREKKITT 187
           CN CG + WEK+ + R +++ T
Sbjct: 330 CNECGKAFWEKSHLTRHQRVHT 351


>AL161931-1|CAH69953.1|  810|Homo sapiens zinc finger protein 33A
           protein.
          Length = 810

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 252 CNNCGSSRWEKAPMLREKKITT 187
           CN CG + WEK+ + R +++ T
Sbjct: 330 CNECGKAFWEKSHLTRHQRVHT 351


>AL117337-4|CAH73315.1|  810|Homo sapiens zinc finger protein 33A
           protein.
          Length = 810

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 252 CNNCGSSRWEKAPMLREKKITT 187
           CN CG + WEK+ + R +++ T
Sbjct: 330 CNECGKAFWEKSHLTRHQRVHT 351


>AL022345-3|CAI23623.1|  778|Homo sapiens zinc finger protein 33B
           protein.
          Length = 778

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 252 CNNCGSSRWEKAPMLREKKITT 187
           CN CG + WEK+ + R +++ T
Sbjct: 331 CNECGKAFWEKSHLTRHQRVHT 352


>AJ491697-1|CAD36956.1|  778|Homo sapiens zinc finger protein 33b
           protein.
          Length = 778

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 252 CNNCGSSRWEKAPMLREKKITT 187
           CN CG + WEK+ + R +++ T
Sbjct: 331 CNECGKAFWEKSHLTRHQRVHT 352


>BC115704-1|AAI15705.1|  394|Homo sapiens ZNF578 protein protein.
          Length = 394

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
 Frame = -1

Query: 417 KAVRCAKCKYTAFSAAQRCKDERHPLKVLDTFKRFFKCLDCKNRTVSLELLPLH------ 256
           K+ +C +C    FS  Q+   ERH  K++ T ++ +KC +C         LP H      
Sbjct: 257 KSYKCEECD-RVFS--QKSNLERH--KIIHTGEKPYKCNECHKTFSHRSSLPCHRRLHSG 311

Query: 255 ----SCNNCGSSRWEKAPMLREKKITT 187
                CN CG +   ++ + R  ++ T
Sbjct: 312 EKPYKCNECGKTFNVQSHLSRHHRLHT 338


>BC103904-1|AAI03905.2|  365|Homo sapiens zinc finger protein 578
           protein.
          Length = 365

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
 Frame = -1

Query: 417 KAVRCAKCKYTAFSAAQRCKDERHPLKVLDTFKRFFKCLDCKNRTVSLELLPLH------ 256
           K+ +C +C    FS  Q+   ERH  K++ T ++ +KC +C         LP H      
Sbjct: 228 KSYKCEECD-RVFS--QKSNLERH--KIIHTGEKPYKCNECHKTFSHRSSLPCHRRLHSG 282

Query: 255 ----SCNNCGSSRWEKAPMLREKKITT 187
                CN CG +   ++ + R  ++ T
Sbjct: 283 EKPYKCNECGKTFNVQSHLSRHHRLHT 309


>AK095562-1|BAC04574.1|  212|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38243 fis, clone FCBBF2006882, moderately
           similar to ZINC FINGER PROTEIN 83. ).
          Length = 212

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
 Frame = -1

Query: 417 KAVRCAKCKYTAFSAAQRCKDERHPLKVLDTFKRFFKCLDCKNRTVSLELLPLH------ 256
           K+ +C +C    FS  Q+   ERH  K++ T ++ +KC +C         LP H      
Sbjct: 75  KSYKCEECD-RVFS--QKSNLERH--KIIHTGEKPYKCNECHKTFSHRSSLPCHRRLHSG 129

Query: 255 ----SCNNCGSSRWEKAPMLREKKITT 187
                CN CG +   ++ + R  ++ T
Sbjct: 130 EKPYKCNECGKTFNVQSHLSRHHRLHT 156


>AK055946-1|BAB71051.1|  365|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31384 fis, clone NHNPC2000212, moderately
           similar to ZINC FINGER PROTEIN 83. ).
          Length = 365

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
 Frame = -1

Query: 417 KAVRCAKCKYTAFSAAQRCKDERHPLKVLDTFKRFFKCLDCKNRTVSLELLPLH------ 256
           K+ +C +C    FS  Q+   ERH  K++ T ++ +KC +C         LP H      
Sbjct: 228 KSYKCEECD-RVFS--QKSNLERH--KIIHTGEKPYKCNECHKTFSHRSSLPCHRRLHSG 282

Query: 255 ----SCNNCGSSRWEKAPMLREKKITT 187
                CN CG +   ++ + R  ++ T
Sbjct: 283 EKPYKCNECGKTFNVQSHLSRHHRLHT 309


>AF226869-1|AAF43389.1|  714|Homo sapiens RB-associated KRAB
           repressor protein.
          Length = 714

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
 Frame = -1

Query: 423 PCKAVRCAK--CKYTAFSAAQRCKDERHPLKVLDTFKRFFK--CLDCKNRTVSLELLPLH 256
           P +   C K  C+ T  +  QR      P    +  K F +   L    RT + E   L+
Sbjct: 344 PYECSECGKTFCQKTHLTLHQRNHSGERPYPCNECGKSFSRKSALSDHQRTHTGE--KLY 401

Query: 255 SCNNCGSSRWEKAPMLREKKITT 187
            CN CG S + K+ ++  ++  T
Sbjct: 402 KCNECGKSYYRKSTLITHQRTHT 424


>AC092032-1|AAQ93364.1|  714|Homo sapiens unknown protein.
          Length = 714

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
 Frame = -1

Query: 423 PCKAVRCAK--CKYTAFSAAQRCKDERHPLKVLDTFKRFFK--CLDCKNRTVSLELLPLH 256
           P +   C K  C+ T  +  QR      P    +  K F +   L    RT + E   L+
Sbjct: 344 PYECSECGKTFCQKTHLTLHQRNHSGERPYPCNECGKSFSRKSALSDHQRTHTGE--KLY 401

Query: 255 SCNNCGSSRWEKAPMLREKKITT 187
            CN CG S + K+ ++  ++  T
Sbjct: 402 KCNECGKSYYRKSTLITHQRTHT 424


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,799,129
Number of Sequences: 237096
Number of extensions: 1200005
Number of successful extensions: 3618
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3590
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4042952858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -